Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 491 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  372 bits (955), Expect = e-107
 Identities = 200/409 (48%), Positives = 274/409 (66%), Gaps = 4/409 (0%)

Query: 1   MLFSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPIL 60
           M F+ L L AP+ +A+    +   + IQA+AIP VLSG D+MA+AQTGTGKTA F LP+L
Sbjct: 1   MSFTSLGLSAPILKAVADKGYQTPSPIQAQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLL 60

Query: 61  AKLMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGLVYGGVSIEAQCQ 120
             L    +A    KQ RALVL PTRELA Q+ + ++ + +   L + +V+GGV I  Q  
Sbjct: 61  ELLSQGPRARS--KQVRALVLTPTRELAAQIAESVTTYGQHLPLRSAVVFGGVGISPQIS 118

Query: 121 QLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPSE 180
           QL  GVD++VATPGRLLDL+++ A     +  LV DEADRMLDMGF  +I +++A+LP +
Sbjct: 119 QLKRGVDILVATPGRLLDLYQQDAVSFSQLETLVLDEADRMLDMGFIHDIKKILAILPPK 178

Query: 181 RQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLI 240
           RQ L+FSAT  D++  L+   +  P  I+V+P+NS +  V+Q +  VD  +K A L  LI
Sbjct: 179 RQNLMFSATFSDEIRTLAKGLVNNPVEISVTPRNSTANTVQQLICPVDKNKKSAALVKLI 238

Query: 241 NKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVLV 300
            +GDWQ+VLVFSR K  A++LA  L  +GI A A HG+  QGAR + LA+F+ G+++VLV
Sbjct: 239 QQGDWQQVLVFSRTKHGANRLAKHLEAKGITAAAIHGNKSQGARTKALANFKSGDVRVLV 298

Query: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEEI 360
           ATD+AARG+DI+ L  VVN++LP V +DYVHRIGRTGRAG  G AV+L  +E+A LL +I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGADGKAVSLVSDEEAKLLADI 358

Query: 361 EALLDKRLPQQWLPGFEPDLTKADPN--PRRNGKAAQKRRAKRRGQGGR 407
           E L+ K LP+  + GFEP  T  + N  P+R+G+    R  K +    R
Sbjct: 359 ERLIGKLLPRAEVEGFEPTHTLPETNLTPKRHGQHKGPRNPKPKSNSQR 407