Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola 67-19

 Score =  373 bits (957), Expect = e-108
 Identities = 206/413 (49%), Positives = 281/413 (68%), Gaps = 7/413 (1%)

Query: 1   MLFSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPIL 60
           M F  L L A + +A+E   + E T +Q +AIP+VL G DLMASAQTGTGKTA F LP+L
Sbjct: 1   MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  AKLMGLAQAEGSDKQP-RALVLVPTRELALQVHQGISDFARFTSLSAGLVYGGVSIEAQC 119
            +L+    ++   ++P RAL+L PTRELA Q+ + +  ++++  L + +V+GGVSI  Q 
Sbjct: 61  -QLLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGGVSINPQM 119

Query: 120 QQLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPS 179
            +L +GVD+++ATPGRLLDL  + A  L  V  LV DEADRMLDMGF  +I  ++A LPS
Sbjct: 120 MKLRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPS 179

Query: 180 ERQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHL 239
           +RQ LLFSAT  D++  L+ + L  P  + V  +N+ S+ V Q V+ VD +RK  LLSHL
Sbjct: 180 KRQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSHL 239

Query: 240 INKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVL 299
           I K DW++VLVF+R K  A+ LA +L + GI A A HG+  QGAR + LA+F+ G+I+VL
Sbjct: 240 IGKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVL 299

Query: 300 VATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEE 359
           VATD+AARG+DI+ L +VVNYELP V +DYVHRIGRTGRA   G A++L C ++  LL +
Sbjct: 300 VATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRD 359

Query: 360 IEALLDKRLPQQWLPGFEPDLT-KADP--NPRRNGKAAQ--KRRAKRRGQGGR 407
           IE LL + +P+  + G+EPD T KA+P  N R+ G+       R   R QGGR
Sbjct: 360 IERLLKREIPRMEIAGYEPDPTIKAEPIQNGRQGGRGGHGGAPRQGDRPQGGR 412