Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 930 a.a., DNA polymerase I (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (280), Expect = 3e-29
 Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 14/253 (5%)

Query: 2   NRFLIIDGLNLVRRIHAAQPN----ENDVNGLPERVTSACRKLLSKHNPSHVTLVWDGDA 57
           N  +++DG + + R + A P+    + +  G    V +  R LL+++ P+ + +V+D   
Sbjct: 21  NPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQMAVVFDAKG 80

Query: 58  ISWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAI-AEADDVIATLASKMV 116
            ++R ++Y +YK  R PMP+ L   +  L + +   G   +     EADDVI T+A +  
Sbjct: 81  KTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVIGTIARQAS 140

Query: 117 QAKGEAIIVST-DKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGD 175
           Q +G A+++ST DK   QL+  +I L +      +  ++   + GV     ID LA+ GD
Sbjct: 141 Q-EGRAVLISTGDKDMAQLVDDKITLINTMTNTILGPDEVSEKFGVGPELIIDLLALQGD 199

Query: 176 SGNKIPGIPGIGPKSACELLKTFRTLANVYASLDK---IGAKQAK----KLEEGRALARL 228
             + IPG+PG+G K+A  +L+    +  + A+ +K   +G + AK    K+ E   + +L
Sbjct: 200 KADNIPGLPGVGEKTALAMLQGVGGVEAILANPEKMPELGFRGAKTMPAKIAEHGDMLKL 259

Query: 229 SYKLVQLQTDIPL 241
           SY+L  ++ D+ L
Sbjct: 260 SYELATIKCDVEL 272