Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 251 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  175 bits (443), Expect = 9e-49
 Identities = 104/251 (41%), Positives = 148/251 (58%), Gaps = 12/251 (4%)

Query: 5   LIIDGLNLVRRIHAAQPNENDVNGLP--ERVTSACRKLLSKHNPSHVTLVWDGDAIS--W 60
           LI+D LNL+RRIHA Q       G P  E    A  +L+    P+H   V+D DA S  W
Sbjct: 6   LIVDALNLIRRIHAVQ-------GSPCVETCQHALDQLIIHSQPTHAVAVFDDDARSSGW 58

Query: 61  RKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMVQAK 119
           R +   DYK GR PMP+ L   +PAL+    +RG     +   EADD+ ATLA K+ +A 
Sbjct: 59  RHQRLPDYKAGRPPMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAG 118

Query: 120 GEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGDSGNK 179
            +A IVSTDKG+ QLLSP +++ D+F ++ +     E++ GV   Q  D+  +AG S +K
Sbjct: 119 HQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFGVLPRQLPDYWGLAGISSSK 178

Query: 180 IPGIPGIGPKSACELLKTFRTLANVYASLDKIGAKQAKKLEEGRALARLSYKLVQLQTDI 239
           +PG+ GIGPKSA +LL  F+ L  +YA LD++  K  KKLE  + +A L   + +LQTD+
Sbjct: 179 VPGVAGIGPKSATQLLIQFQNLEGIYAHLDEVPEKWRKKLETHKEMAFLCRDIARLQTDL 238

Query: 240 PLNTRLANFRV 250
            ++  L   R+
Sbjct: 239 HIDGNLQQLRL 249