Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 928 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  128 bits (322), Expect = 4e-34
 Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 14/263 (5%)

Query: 2   NRFLIIDGLN-LVRRIHAAQPNENDVN---GLPERVTSACRKLLSKHNPSHVTLVWDGDA 57
           N  +++DG + L R  HA  P  N      G    V +  R L+ ++ P+H  +V+D   
Sbjct: 7   NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAKG 66

Query: 58  ISWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMV 116
            ++R +L++ YK  R PMP+ L   +  L   +   G   +     EADDVI TLA +  
Sbjct: 67  KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE-A 125

Query: 117 QAKGEAIIVST-DKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGD 175
           +  G  +++ST DK   QL++P I L +      +  ++   + GV     IDFLA+ GD
Sbjct: 126 EKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALMGD 185

Query: 176 SGNKIPGIPGIGPKSACELLKTFRTLANVYASLDKI------GAK-QAKKLEEGRALARL 228
           S + IPG+PG+G K+A  LL+    L  +YA  +KI      GAK  A KL + + +A L
Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYL 245

Query: 229 SYKLVQLQTDIPLNTRLANFRVE 251
           SYKL  ++TD+ L        V+
Sbjct: 246 SYKLATIKTDVELELTCEQLEVQ 268