Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 253 a.a., flap endonuclease Xni from Dickeya dianthicola 67-19

 Score =  166 bits (421), Expect = 3e-46
 Identities = 104/253 (41%), Positives = 149/253 (58%), Gaps = 16/253 (6%)

Query: 5   LIIDGLNLVRRIHAAQPNENDVNGLPERVTSACRK---LLSKHN-PSHVTLVWDGDAI-- 58
           LI+D LNL+RRIHA Q       G P    SACR    LL +H+ P+H   V+D +    
Sbjct: 6   LIVDALNLIRRIHAVQ-------GSP--CLSACRHALGLLIQHSQPTHAVAVFDDEQRDQ 56

Query: 59  SWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMVQ 117
           SWR +L  +YK GR PMPE LSQ LP ++      G  S  +   EADD+ ATLASK+  
Sbjct: 57  SWRHQLLPEYKAGRPPMPENLSQELPHIRDAFLASGIESWHSPGNEADDLAATLASKVAA 116

Query: 118 AKGEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGDSG 177
              +A IVSTDKG+ QLL+P I++ D+F ++ + +    ++ GV   Q  D+  +AG S 
Sbjct: 117 QGHQATIVSTDKGYCQLLAPTIRIRDYFQKRWLDVPFIRQEFGVQPEQLPDYWGLAGISS 176

Query: 178 NKIPGIPGIGPKSACELLKTFRTLANVYASLDKIGAKQAKKLEEGRALARLSYKLVQLQT 237
           +KIPG+ GIGPK+A +LL+   +L  +Y  L++I  K  +KLE  + +A    ++  L+T
Sbjct: 177 SKIPGVSGIGPKTAAQLLQQAGSLEALYQQLEQIPEKWRRKLEAQQDMAYRCRQVATLRT 236

Query: 238 DIPLNTRLANFRV 250
           D+ LN  L   R+
Sbjct: 237 DLVLNGNLQQLRL 249