Pairwise Alignments

Query, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

Subject, 329 a.a., CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase from Pseudomonas simiae WCS417

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 83/369 (22%), Positives = 147/369 (39%), Gaps = 62/369 (16%)

Query: 44  KSITTAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTERDHINKKEAK 103
           KS T  +G  LL    S+   +  +C  G  CG C+  V  G  +++  E   +  +E  
Sbjct: 10  KSFTGESGKSLLECAKSQGTVLEYSCRTG-RCGVCKANVLQGDTEVMQPELA-LTDEERA 67

Query: 104 EGCRLACQVAVKTDMELELEE----EIFGVKKWQCEVISNDNQATFIKELLLKLPEGEDV 159
            G  L C  A  TD+EL++E+        +K   C + + +  A  +  ++L+ P    +
Sbjct: 68  NGAILTCCRAALTDVELDIEDLGLLADIQIKTMPCRLDTLERLADDVVRVVLRTPPKSAL 127

Query: 160 KFKAGGYIQIEAPAHEVKYSDFDIPTEYRDDWEKYGLFDLVSTVEEDVLRAYSMANYPDE 219
            +  G YI +                                  ++ V R+YS+AN   E
Sbjct: 128 FYLPGQYIDVIG--------------------------------KDGVRRSYSIANAVRE 155

Query: 220 KGVIMLNVRIATPPSEGLPPGKMSSYIF-NLKAGDKVTISGPFGEFFVKE-TDAEMVFIG 277
              + L++R        +P G MS Y F   +  D + + GP G F ++  +   +VF+ 
Sbjct: 156 DAKLELHIR-------QVPDGVMSQYWFGEAQVNDLLRLEGPLGTFCLRNASTTNLVFMA 208

Query: 278 GGAGMAPMRSHIFNQLKGEQT---KRKMTFWYGARSRREIFYQEEFDALAAENDNFEWHV 334
            G G+AP+++ +       +    KR   +W G R+  ++++  +F  L        +  
Sbjct: 209 TGTGIAPVKAMLEALASTSEPLIGKRVYVYW-GGRTENDLYWLPDFPTL-----GMTYRP 262

Query: 335 ALSDPLPEDNWDGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSSVINMLESLGVE 394
            LS      +W G TG++   +    L  +    D   Y CG   M  +   ML   G+ 
Sbjct: 263 VLS--RAGKHWPGATGYVQQAV----LAENLDLADTSVYACGSEAMIHTAREMLTQAGLP 316

Query: 395 QENILLDDF 403
            ++   D F
Sbjct: 317 LKHFHSDAF 325