Pairwise Alignments

Query, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

Subject, 336 a.a., benzoate 1,2-dioxygenase electron transfer component from Pseudomonas putida KT2440

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 81/377 (21%), Positives = 157/377 (41%), Gaps = 56/377 (14%)

Query: 34  VSIRINDDDDKSITTAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTE 93
           +++   D   + I     + +  A   + + IP  C  G  CG C+ K +SG  D+    
Sbjct: 5   IALNFEDGVTRFIEATGQETVADAAYRQGMNIPLDCRDGA-CGTCKCKAESGRYDLGDNF 63

Query: 94  -RDHINKKEAKEGCRLACQVAVKTDMELEL--EEEIFGVKKWQCEVISNDNQATFIKELL 150
             D +++ E  EG  L CQ+  ++D  + +    ++   ++   E   +D +   +  + 
Sbjct: 64  IEDALSEDEIAEGYVLTCQMRAESDCVIRIPASSQLCKTEQATFEAAISDVRQLSVSTIA 123

Query: 151 LKLPEGEDVK---FKAGGYIQIEAPAHEVKYSDFDIPTEYRDDWEKYGLFDLVSTVEEDV 207
           L + +GE +    F  G Y+ ++ P  E                                
Sbjct: 124 LSI-KGEALSRLAFLPGQYVNLKVPGSEQS------------------------------ 152

Query: 208 LRAYSMANYPDEKGVIMLNVRIATPPSEGLPPGKMSSYIFNL-KAGDKVTISGPFGEFFV 266
            RAYS ++   +  V  L           +P G MSS++ NL KAGD ++++GP G F++
Sbjct: 153 -RAYSFSSLQKDGEVSFL--------IRNVPGGLMSSFLTNLAKAGDSLSLAGPLGSFYL 203

Query: 267 KETDAEMVFIGGGAGMAPMRSHIFNQLKGEQTKRKMTFWYGARSRREIFYQEEFDALAAE 326
           +     ++ + GG G+AP  + +  ++  + ++  +   YG  +  ++   +   ALAA 
Sbjct: 204 RPIQRPLLLLAGGTGLAPFTA-MLEKIAEQGSEHPLHLIYGVTNDFDLVELDRLQALAAR 262

Query: 327 NDNFEWHVALSDPLPEDNWDGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIN 386
             NF +   +++P  +    GY       + ++    H    D + Y+CGPP M  +V  
Sbjct: 263 IPNFTYSACVANPDSQYPQKGY-------VTQHIEPRHLNDGDVDVYLCGPPPMVEAVSQ 315

Query: 387 MLESLGVEQENILLDDF 403
            +   G+   N   + F
Sbjct: 316 YVREQGITPANFYYEKF 332