Pairwise Alignments

Query, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

Subject, 328 a.a., Ferredoxin reductase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 92/369 (24%), Positives = 156/369 (42%), Gaps = 64/369 (17%)

Query: 44  KSITTAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTERDHINKKEAK 103
           ++++  AG  LL AL + +I +  +C  G  CG CR KV SG   +L + R+    +  +
Sbjct: 10  RTLSVEAGVNLLDALRANDIPVSYSCMAG-RCGTCRCKVVSG--QVLESGREQRPPQATE 66

Query: 104 -EGCRLACQVAVKTDMELELEEE----IFGVKKWQCEVISNDNQATFIKELLLKLPEGED 158
            EG  LACQ  +     +E+ E     +   +  +  V++ D     I+ L LK    + 
Sbjct: 67  DEGSVLACQTFLTESCTIEIPEPDEVVVHTARIVKATVVAIDAPTHDIQRLRLK--PAKP 124

Query: 159 VKFKAGGYIQIEAPAHEVKYSDFDIPTEYRDDWEKYGLFDLVSTVEEDVLRAYSMANYPD 218
           ++F  G Y Q++                                   D +R YSMA    
Sbjct: 125 IEFSPGQYAQLQ--------------------------------FTPDHIRPYSMAGLCT 152

Query: 219 EKGVIMLNVRIATPPSEGLPPGKMSSYIFN-LKAGDKVTISGPFGEFFVKETDA-EMVFI 276
           + G +  +VR        +P G++S YI N LK GD V +SGP G  +++      M+ +
Sbjct: 153 D-GELEFHVRC-------VPDGRVSGYIKNQLKVGDAVRVSGPLGAAYLRRKHTGPMLCV 204

Query: 277 GGGAGMAPMRSHIFNQLKGEQTKRKMTFWYGARSRREIFYQEEFDALAAENDNFEWHVAL 336
            GG G+AP+ S I   +        +  ++G RS R+++  +  D L       + H  L
Sbjct: 205 AGGTGLAPILS-IVRGVVAAGMHNPIHLYFGVRSERDVYGLDWLDELRQRYPKLQVHTVL 263

Query: 337 SDPLPEDNWDGYTGFIHNVLYENY--LKNHKAPEDCEFYMCGPPIMNSSVINMLESLGVE 394
           +           TG + + + +++  L   +A      Y+CG P M  +   ++  +GV 
Sbjct: 264 ASGAAPGC---RTGLVTDAIRQDWRDLAGFRA------YLCGAPPMVEATSMLIRQMGVL 314

Query: 395 QENILLDDF 403
            E I  D F
Sbjct: 315 PEQIYADAF 323