Pairwise Alignments

Query, 378 a.a., crotonobetainyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 7e-50
 Identities = 111/372 (29%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 5   LTDEQELFVSGIRDLMAKENWESYFAECDENSQYPERFVKELAEMGIDSLLLPEEHGGFE 64
           + DEQ+     +R   A+E  + +  + D++ ++P+  + E+AE+G+  +L+PE+ GG +
Sbjct: 3   VNDEQQQIADAVR-AFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSD 61

Query: 65  EGMVTLTAIWEELGRL-GAPTYVL--YQLPGIATVLRHGNQDQIDKIMALRGTGKQMWNS 121
            G V      EE+    GA + ++  +   G   +LR GN+ Q ++ +    TG  +   
Sbjct: 62  TGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAF 121

Query: 122 AITEPSAGSDVGSLLTTYKRRNGKVYLTGSKCFITSAAGIPYVVVMA-KDADSEKPIFTE 180
           A+TEP AGSD  SL T  +       L GSK FITS      V+V A  D ++ K   + 
Sbjct: 122 ALTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISA 181

Query: 181 WFVDMTKPGIKLSKLP-KLGLKMDSCCELQFDEVELEESDMFGIEGNGFLRVKEEFDSER 239
           + V    PG +++++  KLG      C++ FD V++  ++  G EG G+       +  R
Sbjct: 182 FIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGR 241

Query: 240 FLVALTNYGAAYCAFEDAAKYANQRVQFGETIGRFQLIQDKFAHMAIKLNSMKNMVYETA 299
             +A    G A  AFE A  YAN+R  FG+ +   Q +  + A MA K++  + MV   A
Sbjct: 242 IGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAA 301

Query: 300 WKCDQGTMTSGDSAMCKYFCANAGFEVIDSAMQVLGGYAIAGEHRISRMWRDIRVDRVSG 359
              D G     +++M K F +    +V   A+Q LGGY    +  + R++RD+RV ++  
Sbjct: 302 ALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 360 GSDEMQILTLGR 371
           G+ ++Q + + R
Sbjct: 362 GTSDIQRMVIAR 373