Pairwise Alignments

Query, 677 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 764 a.a., decaheme cytochrome c (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (260), Expect = 1e-26
 Identities = 182/784 (23%), Positives = 288/784 (36%), Gaps = 155/784 (19%)

Query: 13  LVAAVLTGALVGCSGDDGKDGKDGVDGQPGAPGESWKPPV-ATSSLESFVKVIDYTL--- 68
           L+A  L  A+   +  DG+DGKDG  G+PG PG    P   A S++++     D+ L   
Sbjct: 8   LLAMALFCAIGVSACSDGEDGKDGAPGEPGVPGTPGTPGAPAGSTVDTVATAADFKLTLQ 67

Query: 69  -------GEGTISFEFELTNENEELVNGLMNAEGKVAALTDKGFINNR---------NES 112
                  G    S +F  T +N +  +       KVA        N           N +
Sbjct: 68  PADIVVVGADDFSIKFTATGKNSKGDDVPFTGLEKVALYVTNQVANTTSSGAPMLWSNNA 127

Query: 113 PINEVEDNVHI---------GGAVTMS---TEGATLTALGDGHYRFDAPMPGVNAGTEGI 160
             NE   +++          GGA   +    E A       G +  D   P V A  +  
Sbjct: 128 LANEFGSSMYCTPTGKAAARGGAEVDACTLVEDAENPGTYTGTWEHDGNAPVVVADGDPN 187

Query: 161 VWLRV-----GGNSESGIARSNEIVVNKPE-----------GAFSTTTEACFSCHVDYST 204
              RV          +G++ S++++    +              S ++ AC  CH +   
Sbjct: 188 SMFRVMIRTYDVTDATGVSISDKLLSTPLDFIPATGEMAVSAKDSVSSAACIQCHSELMG 247

Query: 205 SPNRHSSYVSQGMDGEVTFVEGCMVCHGSVSRNVVN--EQGFSVGGYAR-NTLSKIGHI- 260
             +      + G       VE C+ CH        N  E+GF+    A  +T+   GH+ 
Sbjct: 248 YDDGDKRIANIGAHHNYQKVENCIACHNPAYAADQNDPEKGFNPNFNAMIHTIHAGGHLA 307

Query: 261 -------NHQEFE-TGFSA-LN-CSSCHSEPTV-NVNVAGPGCIDCH-----DTGGIPGD 304
                  + +EF    F A LN C++CH        NV    C+ CH     +TG    D
Sbjct: 308 EWGVLKGDAEEFAGVHFPAELNECTTCHDNGNQWKENVYREACVGCHVTVNFETGEGHSD 367

Query: 305 IVLGNGSDLRKLH--------EAKSAITSNQAIKDSYKVTGTAPAWFPDSGAAGQWCTTL 356
             L    D + ++        +A   + +     DS +++ ++ ++  ++         +
Sbjct: 368 FQLPQADDSQCMNCHIGNLSPDAVHKVGARAIATDSMEISVSSVSYTENASPTAD--EIV 425

Query: 357 SLFMVDAEGKETLVDLHELFDDTQTIHNPDKPINYVGSYLHGVYNDSVIGRVTGAYDYS- 415
             F V  +G      + + FD T         + +V +   G Y+    G  T   + + 
Sbjct: 426 VTFDVTVDG----APIADGFDFTDYTKYDVMLLGWVDT--DGTYH----GNATKTMNLNG 475

Query: 416 YDAEGRKTMCFAQDAGHG-NPHVVGSTPDLTAWADA-GLMASLRVSFTAKDYMGAESDVV 473
             A G K +   Q  G   +   +  TP  +  ADA G++A  + +    +Y+G    V 
Sbjct: 476 VPAVGGKLVVTLQKDGLDFDGKSIAITPRFSVCADAKGMLA--KCADADIEYVG----VT 529

Query: 474 TIHGYTDVASQADGAVTAYERRHNVGS-----ESCTTCHNS--EANFHKNGNFAEGGLGC 526
               Y ++A+ ADG+     R+ N  S       C+TCH S   A  + N  F +    C
Sbjct: 530 MAPAYWNLAN-ADGSGATPVRQSNPASITADEAKCSTCHGSLTVAKHYGNERFDQ----C 584

Query: 527 VACHNNG------------QDRRAGNSSPGFGPM-------------VHSMHWGVGSKSL 561
           V CHNN              D    +  P F  +              H  H G+   + 
Sbjct: 585 VGCHNNTWGGSYHVAVEYKSDEVDADGKPIFKTLEGVTFSNRDLVTVAHRFHTGLWDDNR 644

Query: 562 DENGKEVSNSASVI---APQTGCVACHDSGVVDLKAVPNQFIKARAYGVS---NKMASPI 615
              G  + +   V+   A  T C ACH  G     A        RA  V     +  +P+
Sbjct: 645 GFPGIHLDSDLEVVGYPALATDCQACHKDGAKFFAADGGLTSGKRAIAVDAAGTQFITPV 704

Query: 616 TANCYACHNDDSALNHMMQNGGT------TTEDVPATEWYKLSTTESCATCHAEGSSFGI 669
             +C +CH   SAL H   NG T      TT D+P          ESCATCHAEG ++G+
Sbjct: 705 AESCRSCHYSASALAHFESNGATVHGKPDTTADLPV---------ESCATCHAEGKTYGV 755

Query: 670 ENYH 673
           +  H
Sbjct: 756 DKVH 759