Pairwise Alignments

Query, 133 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 190 a.a., glycoprotein/polysaccharide metabolism (VIMSS) from Escherichia coli BW25113

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 7   PLAAVAMSAGLLTACATPNASVEIQGEVWFKERIALPPQAVLSVQIQDVSKMDAPAVVLA 66
           P A  ++SA    A   PN S    G VW ++++ALPP AVL+V + D S  DAP+ VLA
Sbjct: 31  PAANTSISATQQPAIQQPNVS----GTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLA 86

Query: 67  AFERDDVTTPAPFGFVI---PRDQFEAGHTYSVGAKITLDGKLMFINTQSYPI 116
                     +PF FV+   P D  +      + A IT++ KL+FI     P+
Sbjct: 87  QKAVRTEGKQSPFSFVLSFNPAD-VQPNARILLSAAITVNDKLVFITDTVQPV 138