Pairwise Alignments

Query, 578 a.a., pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  110 bits (274), Expect = 1e-28
 Identities = 81/236 (34%), Positives = 119/236 (50%), Gaps = 38/236 (16%)

Query: 371 EGKDLSIIYQDEAIAVVNKPAEFLSVP------GKHVTDSVY--SRMRQAFPKATGPLIV 422
           E  DL I+++D+ + VVNKPA  +  P      G  V   VY  S++ +    +  P +V
Sbjct: 112 EKLDLDIVHEDDHLLVVNKPAGMVVHPAYGNWTGTLVNGLVYHFSQLPEMPGNSGRPGLV 171

Query: 423 HRLDMSTSGLMVIALSSEANTALVQQFIGRTVEKRYLARVAGEVQGEEGEITLPLRVDLD 482
           HR+D  TSGL+VIA S +A T L +QF   ++E+ Y+A V GE Q + G  T+   V   
Sbjct: 172 HRIDKDTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALVWGEPQEDAG--TIDAHVGRS 229

Query: 483 DRPRQLVCF----EHGKHAHTYWLVKSRGEGTTLLSLFPKTGRTHQLRVHCAHQDGLGMP 538
            R R+++      + GK+A T+W V  R    +L+    +TGRTHQ+R   AH   LG P
Sbjct: 230 ARDRKVMDVFPEGDQGKNAVTHWKVLKRLRYVSLVQCNLETGRTHQIR---AHMKYLGHP 286

Query: 539 IIGDDLYGAK---------------------ANRLHLHAQYLAFNHPISGERVSFS 573
           +  D +YG                         R  LHA+ L F+HPIS + + F+
Sbjct: 287 LFNDAVYGGDKIRKGTQFSKYKAFVNNCFKLLPRQALHAKSLGFSHPISQDFLQFT 342