Pairwise Alignments

Query, 387 a.a., transcriptional regulator, CdaR (RefSeq) from Shewanella loihica PV-4

Subject, 385 a.a., CdaR family transcriptional regulator from Dickeya dianthicola 67-19

 Score =  327 bits (838), Expect = 3e-94
 Identities = 177/375 (47%), Positives = 246/375 (65%), Gaps = 2/375 (0%)

Query: 2   YFLDNQLAQQIVDRTMAIIGHNINVMNSQGVILGSGEPHRIGSTHEGALLAISQNRTVEL 61
           Y L+N+LAQ+IV RTM II  NINVM+++G I+GSG+  RIG  HEGALL +SQ R V++
Sbjct: 4   YHLNNKLAQEIVARTMKIIDSNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDI 63

Query: 62  NSASAASLQGVKPGINLPLHYQGEIIGVIGITGEPEHLKAFGELLKMTAEMIVEQANSLD 121
           + A A  L GV+PGINLPL   GEI+GVIG+TG P  L+ +GEL+ MTAEM++EQA  L 
Sbjct: 64  DDAVARHLHGVRPGINLPLKIDGEIVGVIGLTGNPGQLRQYGELVCMTAEMMLEQARLLH 123

Query: 122 VAQWRARQQEEFILQLIKPEGRDLNHLKIWAQRLDIDLEMPRVAAVLRI-SDDAGDELAN 180
           +    +R +EE +L LI+ +      L  WAQRL IDL  PRVAAV+ + S   G + A 
Sbjct: 124 MLAQDSRLREELVLNLIRTDELS-PALMEWAQRLGIDLNQPRVAAVVEVDSGQLGVDSAM 182

Query: 181 SQLKTVLHLLETPSRGNLIAMTSMTELVILKPAFLDGKAWSAEAESLRIDRLLKRLPSEL 240
           ++L+ +  LL TP R NLIA+ S+TE+V+LKPA  +   W AE    R+D LL R+    
Sbjct: 183 AELQQLQTLLTTPERNNLIAIVSLTEMVVLKPALNNHGRWDAEEHRRRVDTLLSRMEESS 242

Query: 241 NARLKISLGHYFPATMDINRSYQTALETLNFGQQLHPEQSKYLYEDHALLVMLSGLKHDW 300
             R++++LG+YF     I RSY+TA  T++ G+Q  P Q  Y Y+D  L V+L  L+  W
Sbjct: 243 RLRVRVALGNYFTGPGSIARSYRTARTTMSVGKQRMPLQRSYFYQDLMLPVLLDSLRGGW 302

Query: 301 RGEQLLRPFQRLIDRDKNALLRKTLASYLGHFGDQQACAKALFIHRNTLRYRLDKIAQIT 360
           +  +L+RP  RL   D N LLR+TL ++  +     A AK+LF+HRNTL YRL++I+++T
Sbjct: 303 QANELVRPLARLKAMDSNGLLRRTLNAWFRNNVQPGATAKSLFVHRNTLEYRLNRISELT 362

Query: 361 KVDIQKLDGLLQLYL 375
            +D+   D  L LY+
Sbjct: 363 GLDLGNFDDRLLLYV 377