Pairwise Alignments

Query, 261 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  211 bits (538), Expect = 1e-59
 Identities = 104/226 (46%), Positives = 153/226 (67%), Gaps = 3/226 (1%)

Query: 29  ALEPISFELNRGETLAIVGETGSGKSTLARILVGAEQRTDGEILFEGEALESRNLKQRCR 88
           AL  +SFEL  G+TLA+VGE+G GKSTLAR L   E+ + G +   G+ +   +  QR +
Sbjct: 29  ALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSSGSLKIAGQEVAGADKAQRKQ 88

Query: 89  L---IRMIFQDPNTSLNPRLTVGELLDEPLRFNTDLDKQARFAQVVDTLRKVGLLPEHAD 145
           L   ++M+FQ P  SLNPR  VG+ L EPL  NT+L    R  +V   +++VGL PEH  
Sbjct: 89  LRKDVQMVFQSPYASLNPRQKVGDQLAEPLLINTNLSAAERREKVQAMMKQVGLRPEHYQ 148

Query: 146 FYPHMISEGMKQRVAVARALMLNPKIIIADEALTALDLSVRSQILNLLLKLQQEMGLSYI 205
            YPHM S G +QR+A+ARA+ML PK+++ADE  +ALD+S+++Q+LNL + LQQE   +Y+
Sbjct: 149 RYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQQEFNTAYV 208

Query: 206 FVSHNMNIIRHFSDKIMVLHQGKMVEKATTEKLFNAPEHEYTQRLI 251
           F+SHN+ +++H +D +MV++ G+ VE    E ++  P H YTQ L+
Sbjct: 209 FISHNLAVVQHVADDVMVMYLGRPVEVGPKEDIYARPLHPYTQALL 254