Pairwise Alignments
Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4
Subject, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas sp. DMC3
Score = 450 bits (1158), Expect = e-130 Identities = 280/726 (38%), Positives = 403/726 (55%), Gaps = 50/726 (6%) Query: 1 MLSADVKTQIRTIYKEIAAALPNFRSRREQNYIVAEISKTLAG--EYDKHRR-----IIV 53 M+S ++KT I+ Y A + + R Q ++AEI+K L D+ RR I+ Sbjct: 1 MISTELKTTIQGAYSRFLEA-KSLKPRYGQRLMIAEIAKVLGDIDTDDEGRRSGDPAIVA 59 Query: 54 VEAGTGIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFG 113 VEAGTG GK++AY L +IP A + K++ IATATVALQEQ++ KDLP + SGLNF+F Sbjct: 60 VEAGTGTGKTVAYSLAAIPTAKLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFA 119 Query: 114 LVKGRQRYVCLSKLEMLIG-GDDGTQMAM------WQTKPDHNQVELLQGLLKDFHEGRW 166 L KGR RY+CLSKL+ML+ G T A ++ + D +L +++ +W Sbjct: 120 LAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNKW 179 Query: 167 NGERDTLSQQLPDHLWQQIACDKHSCHRQLASHRHCP------FHKAREDVDTWDVLIAN 220 +G+RD+ L D W ++ D C ++RHCP F+KARE + DV++ N Sbjct: 180 DGDRDSWPNALEDADWARLTTDHSQC-----TNRHCPNFGQCAFYKAREGMGKVDVIVTN 234 Query: 221 HSLLFADLELGGGVILPDPEELYYVIDEAHHLPIVARDFSSAQATLRGAIDWLEKVGKTS 280 H ++ ADL LGGG +LPDP + YV DE HHLP A + LR DWLE K Sbjct: 235 HDMVLADLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNL 294 Query: 281 AKLQNQLKSYNIIAPAQAMLDHINDLTSLLTSVAQY----CDGQAAKF------DNPER- 329 KL L + + +++ + +L + + Q+ C+ Q A F + ER Sbjct: 295 TKL---LAQHPLPGDLGKLIEQVPELAREIKTQQQFMFTACE-QIADFKPGEDVEGRERP 350 Query: 330 RIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIKDGE----LPKHQSEQLL 385 R RF G +P + + L S F ++ LL E + DGE + +Q+E+ Sbjct: 351 RHRFVGGVIPEDMREMGIELKKGYSRLNDLFQRLTDLLKEGM-DGEVNIGIASNQAEEWY 409 Query: 386 SETGFMLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLV-GKQSDYLFNVSPIEVGYMLE 444 G +L R +LW ED PMARW+ G D N SPI L Sbjct: 410 PLFGSLLSRASGNWELWTAFTAEDPEDSPPMARWLTLAESGSLFDIEVNASPILAAETLR 469 Query: 445 TLLWEKAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPFDFQQNATLYLPKM 504 LW A G ++ SATL AL F+ F + GL + + SPF L +P + Sbjct: 470 RSLWNVAYGCLVTSATLTALGTFDRFRMRAGLPKKAVTA--VVPSPFHHADAGVLRVPDL 527 Query: 505 RTEPTDDR-YTDELAEQILTLIDGEMATLVLFASYWQMEKVADLVRSKIKSPLLIQGEAS 563 + +P D +T + ++ L++G TLVLF+S QM+ V D + + + IQG S Sbjct: 528 KADPRDAAAHTAAIIRELPDLVEGSRGTLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLS 587 Query: 564 RQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAE 623 +Q+ L HK R D G+ S++FG SF+EG+DLPG Y +++I K+PF+VP PVE A +E Sbjct: 588 KQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALSE 647 Query: 624 YIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALP 683 +I+A+GGNPF+++++PDAS KL+Q+CGRLLR EED G IT+LDRRLVT+RYGK++L+ALP Sbjct: 648 WIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALP 707 Query: 684 PFRQVI 689 PFR+ I Sbjct: 708 PFRREI 713