Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas sp. DMC3

 Score =  450 bits (1158), Expect = e-130
 Identities = 280/726 (38%), Positives = 403/726 (55%), Gaps = 50/726 (6%)

Query: 1   MLSADVKTQIRTIYKEIAAALPNFRSRREQNYIVAEISKTLAG--EYDKHRR-----IIV 53
           M+S ++KT I+  Y     A  + + R  Q  ++AEI+K L      D+ RR     I+ 
Sbjct: 1   MISTELKTTIQGAYSRFLEA-KSLKPRYGQRLMIAEIAKVLGDIDTDDEGRRSGDPAIVA 59

Query: 54  VEAGTGIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFG 113
           VEAGTG GK++AY L +IP A  + K++ IATATVALQEQ++ KDLP   + SGLNF+F 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPTAKLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFA 119

Query: 114 LVKGRQRYVCLSKLEMLIG-GDDGTQMAM------WQTKPDHNQVELLQGLLKDFHEGRW 166
           L KGR RY+CLSKL+ML+  G   T  A       ++ + D    +L   +++     +W
Sbjct: 120 LAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNKW 179

Query: 167 NGERDTLSQQLPDHLWQQIACDKHSCHRQLASHRHCP------FHKAREDVDTWDVLIAN 220
           +G+RD+    L D  W ++  D   C     ++RHCP      F+KARE +   DV++ N
Sbjct: 180 DGDRDSWPNALEDADWARLTTDHSQC-----TNRHCPNFGQCAFYKAREGMGKVDVIVTN 234

Query: 221 HSLLFADLELGGGVILPDPEELYYVIDEAHHLPIVARDFSSAQATLRGAIDWLEKVGKTS 280
           H ++ ADL LGGG +LPDP +  YV DE HHLP  A    +    LR   DWLE   K  
Sbjct: 235 HDMVLADLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNL 294

Query: 281 AKLQNQLKSYNIIAPAQAMLDHINDLTSLLTSVAQY----CDGQAAKF------DNPER- 329
            KL   L  + +      +++ + +L   + +  Q+    C+ Q A F      +  ER 
Sbjct: 295 TKL---LAQHPLPGDLGKLIEQVPELAREIKTQQQFMFTACE-QIADFKPGEDVEGRERP 350

Query: 330 RIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIKDGE----LPKHQSEQLL 385
           R RF  G +P  +  +   L    S     F ++  LL E + DGE    +  +Q+E+  
Sbjct: 351 RHRFVGGVIPEDMREMGIELKKGYSRLNDLFQRLTDLLKEGM-DGEVNIGIASNQAEEWY 409

Query: 386 SETGFMLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLV-GKQSDYLFNVSPIEVGYMLE 444
              G +L R     +LW     ED     PMARW+     G   D   N SPI     L 
Sbjct: 410 PLFGSLLSRASGNWELWTAFTAEDPEDSPPMARWLTLAESGSLFDIEVNASPILAAETLR 469

Query: 445 TLLWEKAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPFDFQQNATLYLPKM 504
             LW  A G ++ SATL AL  F+ F  + GL     +    + SPF       L +P +
Sbjct: 470 RSLWNVAYGCLVTSATLTALGTFDRFRMRAGLPKKAVTA--VVPSPFHHADAGVLRVPDL 527

Query: 505 RTEPTDDR-YTDELAEQILTLIDGEMATLVLFASYWQMEKVADLVRSKIKSPLLIQGEAS 563
           + +P D   +T  +  ++  L++G   TLVLF+S  QM+ V D +    +  + IQG  S
Sbjct: 528 KADPRDAAAHTAAIIRELPDLVEGSRGTLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLS 587

Query: 564 RQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAE 623
           +Q+ L  HK R D G+ S++FG  SF+EG+DLPG Y  +++I K+PF+VP  PVE A +E
Sbjct: 588 KQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALSE 647

Query: 624 YIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALP 683
           +I+A+GGNPF+++++PDAS KL+Q+CGRLLR EED G IT+LDRRLVT+RYGK++L+ALP
Sbjct: 648 WIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALP 707

Query: 684 PFRQVI 689
           PFR+ I
Sbjct: 708 PFRREI 713