Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 648 a.a., putative ATP-dependent DNA helicase YoaA from Methylophilus sp. DMC18

 Score =  228 bits (580), Expect = 9e-64
 Identities = 203/702 (28%), Positives = 323/702 (46%), Gaps = 100/702 (14%)

Query: 9   QIRTIYKE---IAAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLA 65
           Q+ + + E   +A A+P+FRSR +Q  +   I++ +     + ++ +V EAGTG GK+ A
Sbjct: 6   QVSSAFSENGSLAQAMPDFRSRPQQQEMALAIAEAI-----EQQQQLVAEAGTGTGKTYA 60

Query: 66  YILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFGLVKGRQRYVCLS 125
           Y++     AL S  KV I+T T  LQ+QL  +DLP   +   +  +  ++KGR  Y+C  
Sbjct: 61  YLVP----ALLSGGKVIISTGTKTLQDQLFQRDLPAVREALKVPVSVAMLKGRANYLCHY 116

Query: 126 KLEMLIGGDDGTQMAMWQTKPDHNQVELLQGLLKDFHEGRWNGERDTLSQQLPDH--LWQ 183
            L+        +Q   +Q++ D   + +LQ     F E    G++  L + +P+   +WQ
Sbjct: 117 HLQR------ASQEGRFQSREDAQYIPILQS----FAEHSQTGDKAELVE-VPEQATVWQ 165

Query: 184 QIACDKHSCHRQLAS-HRHCPFHKAREDVDTWDVLIANHSLLFADLEL---GGGVILPDP 239
           Q+   + +C  Q    ++ C   +AR+     DV++ NH L FAD+ L   G   +LP  
Sbjct: 166 QVTSTRDNCVGQDCQFYKQCFVMEARKQALAADVVVVNHHLFFADVMLRDEGVAELLPSA 225

Query: 240 EELYYVIDEAHHLPIVARDFSSAQATLRGAIDWLEKVGKTSAKLQNQLKSYNIIAPAQAM 299
             +  V DEAH LP VA  F     +                                 +
Sbjct: 226 NTV--VFDEAHQLPEVAGLFFGEDIS------------------------------TSQL 253

Query: 300 LDHINDLTSLLTSVAQYCDGQAAKFDNPERRIR-------FEHGKLPAALTMLAENLATA 352
           +D   D      S+A+ C   +      E+  R       FE  ++PA      +N   A
Sbjct: 254 MDLARDSQMAYLSLAKDCVALSEAVPPLEKACRDFRLVFQFEGSRMPAQKAQTMKNFDEA 313

Query: 353 SSSALKQFNKMLVLLN-EAIKDGELPKHQSEQLLSETGFMLQRLENLQKLWKMMAKEDSA 411
               L+    +  +L  +A +D  L K              QR E L  L +   K + A
Sbjct: 314 FQRMLETLAALTAVLETQAGRDPLLEK------------CWQRGEALLALLQAWLKGNHA 361

Query: 412 KGAPMARWVEHLVGKQSDYLFNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFNHFT 471
               + RWVE  V  QS  L + +P+ V       L  +    +  SATL   ++F+H+ 
Sbjct: 362 N---LVRWVE--VFSQSVQL-HATPLSVADGFGKQLNAQPRAWIFTSATLAVKSDFSHYQ 415

Query: 472 HQVGLSINDGSRYLAMDSPFDFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMA- 530
            Q+GL       +    SPFD+ Q A LY+P    EP    Y   +A   L ++      
Sbjct: 416 SQMGLLAAQTRHW---QSPFDYGQQALLYVPTGMPEPNSSAYAAAVAAVSLPVLQASRGR 472

Query: 531 TLVLFASYWQMEKVADLVRSKIKS-----PLLIQGEASRQQLLQDHKQRCDNGEVSIIFG 585
             VL  S   M +V  L+++  +      PLL+QGE++R +LL   +   +    +++ G
Sbjct: 473 AFVLCTSLKAMREVHALLKNAFEELGLNYPLLMQGESNRTELLDRFRSHGN----AVLVG 528

Query: 586 TGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKL 645
           + SF EG+D+ G+ L+ +II KLPFA P  PV  A  + + A+G N F++  +P A   L
Sbjct: 529 SQSFWEGVDVRGEALSCVIIDKLPFAPPDDPVLAARIDKMNAEGKNAFMEYQLPYAVITL 588

Query: 646 IQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALPPFRQ 687
            Q  GRL+R E+D G + I D RLV K YG+ +  +LPPF++
Sbjct: 589 KQGAGRLIRDEQDVGVLMICDPRLVDKPYGRRIWQSLPPFKR 630