Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 714 a.a., ATP-dependent helicase DinG/Rad3 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  343 bits (881), Expect = 1e-98
 Identities = 231/702 (32%), Positives = 371/702 (52%), Gaps = 32/702 (4%)

Query: 2   LSADVKTQIRTIYKEIAAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIG 61
           L+A +K QI   YK +   +P+F  R  Q  ++A++++TLAGE  +H   + +EA TG+G
Sbjct: 3   LTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRH---LAIEAPTGVG 59

Query: 62  KSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQ-SGLNFTFGLVKGRQR 120
           K+L+Y++  I +A   +K + ++TA VALQ+Q+ +KDLP   K    L FT     GR R
Sbjct: 60  KTLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLLRKIIPDLRFTAAF--GRGR 117

Query: 121 YVCLSKLEMLIGGDDGTQMAMW----QTKPDHNQVELLQGLLKDFHEG-RWNGERDTLSQ 175
           YVC   L  L   +   Q  +     +  P++ + +     LK   +G +W+G RD    
Sbjct: 118 YVCPRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLKGDLDGYKWDGLRDHTDI 177

Query: 176 QLPDHLWQQIACDKHSC-HRQLASHRHCPFHKAREDVDTWDVLIANHSLLFADLELGGGV 234
            + D LW++++ DK SC +R    +R CPF  AR ++   +V++ANH+L+ A +E     
Sbjct: 178 AIDDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAME--SEA 235

Query: 235 ILPDPEELYYVIDEAHHLPIVARDFSSAQATLRGA-----IDWLEKVGKTSAKLQNQLKS 289
           +LP+P+ L  V+DE HHLP VARD     A +  +     +D   K+  T  + Q + K+
Sbjct: 236 VLPEPKHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCME-QFRPKT 294

Query: 290 YNIIAPAQAMLDHINDLTSLLTSVAQYCDGQAAKFDNPERRIRFEHGKLPAALTMLAENL 349
              +A  + +  H  ++  L+ S+    +         E R  F  G+LP  +  + + L
Sbjct: 295 TPPLANPERLNAHCEEVYELIASLNAILNLYMPAAQEAEHR--FAMGELPDEVMEICQRL 352

Query: 350 ATASSSALKQFNKMLVLLNEAIKDGELPKHQSEQLLSETGFMLQRLENLQKLWKMMAKED 409
           A  + +        L  L+E  K G     +  +++ +    L   E   KLW++ +   
Sbjct: 353 AKLTETLRGLAESFLNDLSE--KTGSHDIVRLHRVILQMNRALGMFEAQSKLWRLASMAQ 410

Query: 410 SAKGAPMARWVEHLVGK-QSDYLFNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFN 468
           S+ GAP+++W    + + Q    F+   I V   LE LLW     +++ SATLR+LN+F+
Sbjct: 411 SS-GAPVSKWATREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFS 469

Query: 469 HFTHQVGLSINDGSRYLAMDSPFDFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDG- 527
                 GL    G R++A+DSPF+  +   L +P+MR EPT D     +AE      +  
Sbjct: 470 RLQEMSGLKEKAGDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMAAYFREQL 529

Query: 528 ----EMATLVLFASYWQMEKVADLVRSKIKSPLLIQGEASRQQLLQDHKQRCDNGEVSII 583
                   LVLFAS   M++  + V + ++  LL+QG+  R +L++ H++R ++GE S++
Sbjct: 530 ESKKHHGMLVLFASGRAMQRFLEHV-ADVRLLLLVQGDQPRYRLVELHRKRVESGERSVL 588

Query: 584 FGTGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASR 643
            G  SF+EGLDL G+ LT + I K+ F    SPV     E++K+    PF   ++P AS 
Sbjct: 589 VGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASF 648

Query: 644 KLIQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALPPF 685
            LIQ  GRL+R     G + I D+RL+TK YG+ LL+ALP F
Sbjct: 649 NLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVF 690