Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 636 a.a., putative ATP-dependent DNA helicase YoaA from Escherichia coli ECRC62

 Score =  221 bits (562), Expect = 1e-61
 Identities = 185/677 (27%), Positives = 313/677 (46%), Gaps = 78/677 (11%)

Query: 16  EIAAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLAYILGSIPLAL 75
           ++A A+P F+ R  Q  +   +++ +     +  + +VVEAGTG GK+ AY+      AL
Sbjct: 10  QLAKAIPGFKPREPQRQMAVAVTQAI-----EKGQPLVVEAGTGTGKTYAYLAP----AL 60

Query: 76  ASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFGLVKGRQRYVCLSKLEM--LIGG 133
            +KKKV I+T + ALQ+QL ++DLP  SK         L+KGR  Y+CL +LE   L GG
Sbjct: 61  RAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGG 120

Query: 134 DDGTQMAMWQTKPDHNQVELLQGLLKDFHEGRWNGERDTLSQQLPD-HLWQQIACDKHSC 192
           D   Q+            +++  LL+ +     +G+  T      D   W  +     +C
Sbjct: 121 DLPVQILS----------DVI--LLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNC 168

Query: 193 -HRQLASHRHCPFHKAREDVDTWDVLIANHSLLFADL---ELGGGVILPDPEELYYVIDE 248
                  ++ C   KAR+     DV++ NH L  AD+   E G G ++P+ + +  + DE
Sbjct: 169 LGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVM--IFDE 226

Query: 249 AHHLPIVARDFSSAQATLRGAIDWLEKVGKTSAKLQNQLKSYNIIAPAQAMLDHINDLTS 308
           AH LP +A  +     + R  +D  + +   +   + +LK                    
Sbjct: 227 AHQLPDIASQYFGQSLSSRQLLDLAKDI---TIAYRTELKD------------------- 264

Query: 309 LLTSVAQYCDGQAAKFDNPERRIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLN 368
             T   Q C  + A+     +  R + G+ P     L E LA        Q  +  +LL+
Sbjct: 265 --TQQLQKCADRLAQ---SAQDFRLQLGE-PGYRGNLRELLANP------QIQRAFLLLD 312

Query: 369 EAIKDGELPKHQSEQLLSETGFMLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLVGKQS 428
           + +   EL    ++  L  +  +    E        + +         + W E       
Sbjct: 313 DTL---ELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYECT---SR 366

Query: 429 DYLFNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMD 488
            +   ++P+ V    + L+ +K    +  SATL   ++ +HFT ++G+   + +  L + 
Sbjct: 367 HFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGI---EQAESLLLP 423

Query: 489 SPFDFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMAT-LVLFASYWQMEKVADL 547
           SPFD+ + A L +P+   +        +LA  +  +I+       +L  S+  M  +A+ 
Sbjct: 424 SPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQ 483

Query: 548 VRSKIKSPLLIQGEASRQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITK 607
            R+ +  P+L+QGE S+ QLLQ      +    +++  T SF EG+D+ GD L+ +II K
Sbjct: 484 FRATMTLPVLLQGETSKGQLLQQFVSAGN----ALLVATSSFWEGVDVRGDTLSLVIIDK 539

Query: 608 LPFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDR 667
           LPF  P  P+ +A  E  + +GG+PF ++ +PDA   L Q  GRL+R  +D G + I D 
Sbjct: 540 LPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDN 599

Query: 668 RLVTKRYGKSLLDALPP 684
           RLV + YG + L +LPP
Sbjct: 600 RLVMRPYGATFLASLPP 616