Pairwise Alignments

Query, 876 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  289 bits (740), Expect = 4e-82
 Identities = 270/915 (29%), Positives = 403/915 (44%), Gaps = 118/915 (12%)

Query: 1   MYKNSLLANSVRFALVGGAAMTA-FTAPAVFAADEQAADKVERIEVTGSRIKRSDLEGAS 59
           M K S LA +V+ +L+   + +  F A    AA+E A+   ERI VTGSRI+R D+E AS
Sbjct: 1   MIKTSRLAAAVKLSLIATVSTSGYFVANNAVAAEESAS--FERIAVTGSRIQRQDMETAS 58

Query: 60  PVTTITADDMKVEGNFTVADALRNSNLNSFGSFSERSGSSAQSQATINLRGAGSSRTLVL 119
           PVT I A  ++ EG  +V + L+     +  +    + + A   A ++LRG G+SRTLVL
Sbjct: 59  PVTVIDASAIRAEGYNSVDEILQAQPAMAGMAVGSTTNNGADGVAQVDLRGMGASRTLVL 118

Query: 120 IDGKRFPGSPTLGGSSANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNFQG 179
           ++G+R   S +   S+ +LN IP+A + R+EIL DGAS+ YGSDAIAGVVNII KK+F+G
Sbjct: 119 LNGRRMVNSGSGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEG 178

Query: 180 IEFNVGGGSRDRDGGLTSKEFSVVAGYEMDKGNITFAFDHQDRKGIADGDRAFSAPWMRD 239
            + ++ GG+ D+  G  + E S + G+  D GN TF   + DR G+   DR         
Sbjct: 179 FQLDINGGATDKGDG-ENVEISALYGFNTDGGNYTFGVAYSDRGGVMQKDR--------- 228

Query: 240 LNGDGEIQAYSETDGWSIYGATIASPDFSEAQASPLCDDLAAQYGDNVFKTVKADDDWGP 299
                          W   GA+   P  S      L   +  + G+ V +T         
Sbjct: 229 --------------DWVEKGASSFIPTGS------LGGKVQDENGNWVDRTEG------- 261

Query: 300 GSTYCMYAYGNVSYNKASVDRNTVYVDANYEIAEDVEWFGRIMFTQNNSFGRY-APPAAA 358
                 Y +   S+ +   +R + + +A  E A ++ + G +++T+  S     A PA+ 
Sbjct: 262 ------YDFTQDSWLQTPNERYSFFANATQEFANEIVFTGDLLYTKRQSEQMMAAQPASV 315

Query: 359 WNNM----SADNPHNPYGEETRGYFRWVGIG-------TRDGNVDDYNQDYLT-----GL 402
             ++    S  N      E   G       G       T D     Y QD  T     GL
Sbjct: 316 MLDVCTPTSTGNCITLTDEMVAGGITPDDQGRVEYRRRTTDAGNRIYEQDTDTLRVSAGL 375

Query: 403 RGSISAWNDATWEFYYHYNKADNKSIGEYYLSYSGLAYNEANGI----------DLGSEA 452
            G         W+  Y Y K  NK+  E ++  S  A N A  +          D  S+A
Sbjct: 376 AGEFDVHTGIAWDLSYTYGK--NKA--ETWVHNSINAKNMAQSVYDNQDAWFSGDPLSQA 431

Query: 453 GVNNMKATTLTQDRATFHQYNAGIGFDAFELPGGAVAHYFGLEYFEQDFASIYDAQSEAG 512
            V+++     T      H  +  I  +AF+L  G VA+  G EY         D    AG
Sbjct: 432 IVDDISYLESTTGGNEQHIVSGVISGEAFDLEAGPVAYAIGAEYRHDSGYYNPDPVIVAG 491

Query: 513 LIGGSAGNSAGGDRQVWAAFYEAAMPLTDTIELNIAARYDDYSDFGNNVAPKASVRWQAL 572
               +  +   G   V + + E ++P TD +    A R+DDYS FGN    K  + ++A 
Sbjct: 492 EGTAAQQDPTDGSYSVVSVYQEVSVPFTDKLTGEFALRFDDYSTFGNASTWKIGLTYEAT 551

Query: 573 DNLVLRASYSEAFRAPALDQLYAATTFSADDGTDYPYCVSNGIADCPEKQYDTYIRANKD 632
           D+L+LRA  +  FRAP + +L+     S  D  D P+       +  + Q      ++ D
Sbjct: 552 DDLMLRAVAATGFRAPNVSELFGGNVGSY-DYLDDPW------GNEQDPQILVNYTSDPD 604

Query: 633 LGPETSEYINLGLAW--DIVDNFGIKVDYFDLKIDDVISRRSITNVMRGIASGNLAPSDT 690
           L  E+SE    GL +    +D   + +DY+  KI D ISR  +   +    +G+    +T
Sbjct: 605 LKAESSESYTAGLVYSPSYIDGMSLTLDYWRFKIKDAISRLDVQAGLNACHAGDTTACET 664

Query: 691 FYVVRAPGEAGKLGKALEVGTGYGNSDKLQIKGIDVGLNGNFETDFGDFGIAWTNSFVLE 750
           F +       G L       T  G  D     GID  L   FE      G+ W+ S  L 
Sbjct: 665 FGIT----PDGNLENLTNPLTNVGYQD---TSGIDFNLAYRFE----GLGLDWSISNDLT 713

Query: 751 YVEEVEGGSGAIDTAG-----WSGQPEYKSVFTTTYTMGDHRVSWNMNYTDSTYESSKSV 805
           Y+ E E     ID  G     + G  + K+ F+     GD    W++ Y++        +
Sbjct: 714 YLLEFE--QDGIDYTGTIGGMFGGYAKVKNNFSVKAGQGD----WSLMYSNRFIGEMDDI 767

Query: 806 --GDTIVPEGSLDSWLIHNISYTYDAGSFGAIMLGVNNLTDEDPVLSSDGKFENA--DLY 861
             GDT+      DS L HNIS  Y         LGV N TDE PV+ + G       ++Y
Sbjct: 768 NYGDTV------DSVLYHNISGMYHINDSITASLGVKNFTDEKPVMVASGNEAGTVPEVY 821

Query: 862 NNYGREYRASYTLKF 876
           +  GR+     T+KF
Sbjct: 822 DTIGRQIYGGVTVKF 836