Pairwise Alignments

Query, 380 a.a., nuclease SbcCD, D subunit (RefSeq) from Shewanella loihica PV-4

Subject, 414 a.a., Nuclease SbcCD subunit D from Azospirillum sp. SherDot2

 Score =  118 bits (296), Expect = 3e-31
 Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 20/271 (7%)

Query: 2   KFIHTSDWHIGRQLHNQSLLDDQRHVLDQIVSLAKTHEVDALIVAGDIYDRSVPPANAVA 61
           + +HT+DWH+G+ LH      +    LD ++     H VDAL++AGD++D   PP  A+A
Sbjct: 5   RLLHTADWHLGQTLHGIPRDAEHACFLDWLIDRIGEHRVDALVIAGDVFDGQNPPIPALA 64

Query: 62  LLDEVLNEFIAL--GIDVIMIAGNHDGHERLGFAARQMQASGLHIIGPL----------A 109
           L    +    A    +D++++AGNHD   RL   +  M   G+ +IG L          +
Sbjct: 65  LFYRFVARAKAQHPRLDIVVVAGNHDSASRLEAPSPLMTEMGVRVIGTLPASAAGMFDPS 124

Query: 110 PKVSPIRLSSGSGDAIFYPLPYAEPATVRQQLECE-ASSHEEAMVELLKQV----QDHDS 164
           P + P+  + G+  A    +PY  P+ +    E E      E +  L  Q     ++   
Sbjct: 125 PLIVPLHDADGTVAARCVAMPYLRPSDLPAVEEAEDIDPLIEGVRRLYSQAWSGGRERCG 184

Query: 165 QGLPKVVIGHCFLDGGSESDSERPLSIGGADKISPKHFAPFD--YTALGHLHGPQ-YKGA 221
           +    ++ GHC++ GG+ S+      +GG     P    P D  Y ALGHLH  Q   G 
Sbjct: 185 RSEALILTGHCYMRGGALSELSERKILGGNLHALPVDIFPDDAAYVALGHLHRAQAVGGR 244

Query: 222 EQVRYSGSILKYSFSEQHQNKSVTLVELNAG 252
           E VRYSGS +  +  EQ     V L E   G
Sbjct: 245 EAVRYSGSPIPLALDEQPYPHQVVLTEFAGG 275