Pairwise Alignments

Query, 1018 a.a., SMC domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 1227 a.a., AAA family ATPase from Dickeya dianthicola ME23

 Score =  252 bits (644), Expect = 1e-70
 Identities = 337/1251 (26%), Positives = 515/1251 (41%), Gaps = 285/1251 (22%)

Query: 1    MRPLRLTMTAFGPFADEQIIDFAA--LGSNPLFLINGPTGAGKTTILDAICFALYGKTTG 58
            M+ L L +        E  IDF      SN LF I GPTGAGKTT+LDAIC ALY +T  
Sbjct: 1    MKILSLRLKNLNSLQGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60

Query: 59   DEREGTQMRCDMADEQRLTQVSFEFELGSTRYLIRRVPEQPRAKKSGEGVTLQKSEAQLS 118
              + G      M           EFE+ +  Y  R    Q RA  S EG  LQ  + +L+
Sbjct: 61   -LKVGPSQNELMTRHTAECLAEVEFEVKNVAY--RAFWSQRRAHNSPEG-NLQPPKVELA 116

Query: 119  RVDTDGSETLLVAAKVSDATAQIEQLTGLDVDQFRQVMVLPQGKFRELLMADSKAREKIF 178
             +  DG    ++  KV+D       +TGLD D+F + M+L QG+F   L AD+  R ++ 
Sbjct: 117  -LCADGK---ILTDKVNDKLTMTADITGLDFDRFTKSMMLSQGQFAAFLNADANQRAELL 172

Query: 179  SQLFQTHIYRRIEER--------------------------------LKQQAAGIRRDVE 206
             +L  T IY +I ER                                L+QQ   IR+  +
Sbjct: 173  EELTGTDIYGQISERVFEKHKDAQNQLETLRAQVATLELLSDEQRQALEQQLDAIRQQEQ 232

Query: 207  AMRNRRGGIL-------------EGAELASDQALIEEQAL------------------IA 235
            ++   R  +L             +  + A  Q   +EQ                    + 
Sbjct: 233  SLSLHREEVLGHQRWYDTLLQHQQAQQQAQQQCAAQEQVQQQSQPQLDKLQRSEPAEKLR 292

Query: 236  P---ELELAQAHKQQAEQALLTANQNLDKGLKLQSDFNRLQALQSEGEGLKARQLEATLW 292
            P   E E A   KQ+  Q L +A Q +D+    Q D   L  +Q E + L  RQ  A   
Sbjct: 293  PRFDERERALREKQRLTQQLNSARQQIDR----QQDALNLLKVQLE-KALSTRQQHAEHR 347

Query: 293  QQRLQAAG-RANSLSPLYRAMQSRLGEQRSASQHLDECQQ-IHASAEQALNQSQQAFEQL 350
            QQ+      R   L       Q++  +Q+ A   L E Q+ + A   +   Q +Q  +QL
Sbjct: 348  QQQETLINERILPLDHHIATQQAQRAQQQQALDSLLELQKTLIAGLTKLQRQQEQTRQQL 407

Query: 351  GALE--QEQLSQQQRLTQ----LEALAPQLEQLNQLSERLADGQAKMQAAEASGKQSAKQ 404
              +E  + Q S+ Q L       +A  PQ ++  Q  + L +  A+ Q       Q    
Sbjct: 408  AEIETYRRQHSRHQHLGSHIPLWQAQFPQQQKWQQDLQVLQEKTAQQQIQAEYLDQQHAS 467

Query: 405  LDELNQARQEIVSR-REILKR--DAEPQLALQQSLSDGRAQL--KVFERWQQQGL--EIA 457
            L E +QA+Q    R R++L      + QL  +Q L+D R QL  ++ ER  +Q L   +A
Sbjct: 468  LAEKHQAQQSACERARQLLTEHLQQDEQLEAEQPLADLRQQLAQRMAERPDRQQLATSVA 527

Query: 458  ALEQKLTAAKTAGSELAEKHK--QAI-------------------DAHKRLELSWHRGQA 496
             L+Q ++      ++  +  +  QA+                   D  KR EL  H    
Sbjct: 528  VLQQLISQRTLLEAQQLDTQRRIQALEDQQTQQRQDYQRQADHLTDLDKRHELELHIVSL 587

Query: 497  ARLAAELSPGEPCPVCGSLEHPEPAMGEFDLPSDEALA---------------------- 534
             R   +L PG+ CP+CGS  HP     +   PS+  L                       
Sbjct: 588  ERERRQLQPGKECPLCGSPHHPAVERYQALRPSETQLRLHALRQEVDALKAGVVQTETQL 647

Query: 535  ----QAKQRESDALNLLHQARSEYKLLQQSLSN--------LQLSA-------SLLQEEL 575
                Q +Q++ +AL+ + +  +  +L  QS+S         LQL A       S  +E+ 
Sbjct: 648  QLQKQHRQQQQNALDGVRRDDASLRLQCQSVSKRLLVDFDPLQLPALHQWIEESDAREQS 707

Query: 576  GEAAGLSFDEHQARLAELSDGFERAKAAQQSLAQ------LETQLERSEHQGRE-LQTAL 628
             +A   S + +Q  + E  D      +AQQ LAQ      L TQ + S H  RE L+  L
Sbjct: 708  LQAQIASRERNQRHIQESKD---LLTSAQQLLAQTVQQLELNTQQQTSLHASREELRLLL 764

Query: 629  DEARAHYGKLAEQLAS----------------------------------DKGQYQQISA 654
            ++      +L + L                                    ++ Q Q   A
Sbjct: 765  EKTERELQRLHDSLRQTLETFDLTAPTLAQQEDWLRQRQTEWLRWQESEHEQHQCQPQLA 824

Query: 655  AIP---------QGFSDVA--TLSTAIADLTKTIDE-----------------LKARQQS 686
            A+          Q  +D A  T    +AD  +T+++                 LK  +  
Sbjct: 825  ALEAEIIASRQRQEETDAAIKTYQQQLADTQRTLEQAQQQRWQLMGNQAVNDVLKQLRHV 884

Query: 687  VRAAHAKAEQDNAAAKASLEAASRRLGEVNALAEQES----------LSFQQALATSEFE 736
             +A   + +Q     + S    SR  GE+++L +Q              F +ALA + F+
Sbjct: 885  SQALELENQQAQQQWQQSQSQQSRLSGEIDSLEQQNQHAETTLQQLQAQFGEALAAAGFD 944

Query: 737  SVAAFEQACLTEAEQAELSNQIKAFEQALITHQANLSQLQEALAGCEAPDMSALEQQKMD 796
              AAF  A L EAE+           Q L+T +  LSQ ++ +        S LEQ    
Sbjct: 945  DEAAFRHALLEEAER-----------QQLLTLKERLSQRRQQVEALLQQANSTLEQHMAT 993

Query: 797  AEQVMQQALAQWQ----------KVSARAAQLSQTQEQLKA---------LDLKAGAL-E 836
              + M + ++ W            V A AA   + ++QL +         L L+A A  +
Sbjct: 994  RPESMPEGISDWDIRQLISGLGDMVKAEAAHQGELRQQLASDQQRRDKQRLLLEAIARGQ 1053

Query: 837  QQYAVVGTLADVANGNTGNKISLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEERA 896
            QQ    G L  +     G+K   +RF   + LD ++  A+ +L  +  GRY L RK    
Sbjct: 1054 QQCDDWGYLNQLIGSQKGDKF--RRFAQGLTLDHLVFLANRQLSRLH-GRYLLQRKA--- 1107

Query: 897  KGNKASGLELEVEDAYTAK-VRSVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLF 955
                +  LEL+V D + A  VR   TLSGGESF+ +L++AL LSD+V       ++D+LF
Sbjct: 1108 ----SDTLELQVADTWQADAVRDTRTLSGGESFLVSLALALALSDLVSTKT---RIDSLF 1160

Query: 956  IDEGFGSLDQDSLELAIRTLMDLQSAGRMVGVISHVTEMKEQIASRIDILK 1006
            +DEGFG+LD ++L+ A+  L +L ++G+ +GVISHV  MK++I  +I + K
Sbjct: 1161 LDEGFGTLDGETLDTALDVLDNLNASGKSIGVISHVEAMKDRIQVQIRVRK 1211