Pairwise Alignments

Query, 1018 a.a., SMC domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 1200 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  183 bits (465), Expect = 6e-50
 Identities = 307/1237 (24%), Positives = 501/1237 (40%), Gaps = 259/1237 (20%)

Query: 1    MRPLRLTMTAFGPFADEQIIDFAA--LGSNPLFLINGPTGAGKTTILDAICFALY----- 53
            M+ +RL +      A EQ I+F A  L    L  I G TGAGK+T+LDA+C AL+     
Sbjct: 1    MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60

Query: 54   -----GKTTGDEREGTQMRCDMADEQRLTQVSF-EFEL---GSTRYLIRRVPEQPRAKKS 104
                 GK      +  Q+   +   +R T  ++ E E       RY+ R   E  RA+  
Sbjct: 61   LKTHEGKLKDVSGQDVQIDSTLNILRRGTAHAYSELEFIAQNQKRYIARW--ELKRARGH 118

Query: 105  GEGVTLQKSEAQLSRVDTDGSETLLVAAKVSDATAQIEQLTGLDVDQFRQVMVLPQGKFR 164
             EG  LQ  +  L  V TDG+   ++  K  +   Q+ +L GL  +QF + ++L Q +  
Sbjct: 119  AEG-KLQAVQRALVCV-TDGN---MLTDKAKECDKQVLELIGLSFEQFTRAVLLAQSEVG 173

Query: 165  ELLMADSKAREKIFSQLFQTHIYRRIEERLKQQAAGIRRDVEAMRNRRGGI--------- 215
              L A    R  +   L  ++I+  + +   ++   +R   E +    G +         
Sbjct: 174  AFLKAKDNERADLLEYLTNSNIFSLVGKAAFERTKMVRVQREKLNELIGHVELLSTEQMA 233

Query: 216  -LEGAELASDQA---LIEEQALIAPELELAQAH---------KQQAEQALLTANQNLDKG 262
             LE    A  Q    L + + ++  EL+  ++H         KQ+  Q  L ANQ     
Sbjct: 234  QLEDQYKARQQQVQQLEQHRQILRNELQWHKSHDLLYTQIQAKQEFYQVQLDANQ----- 288

Query: 263  LKLQSDFNRLQALQSEGEGLKARQLEATLWQQRLQAAGRANS--------LSPLYRAMQS 314
             KL     RLQ L+ +   ++   L+    +Q+LQ   +  S        +   Y+A Q 
Sbjct: 289  -KLGEQRQRLQQLE-QFASIRPILLQQKRCEQQLQNLEKQISQHQQLFQQVCEQYQAAQK 346

Query: 315  RLGEQRSA------------------SQHLDECQQIHASAEQALNQ-SQQAFEQLGALEQ 355
                 R+A                   Q LD+ + I +   Q  N+  ++  EQ   LEQ
Sbjct: 347  SCQAARTAVENEKLRQNQLAPYLNQAKQFLDQRKLIESQYTQVRNKLKEKTAEQQQQLEQ 406

Query: 356  EQLSQQQRLTQLEALAPQLEQLNQLSERL----ADGQAKMQ--------AAEASGKQSAK 403
             Q +QQQ   QLE +  QL+Q    S++L    ++ QA +Q        A +AS   +  
Sbjct: 407  LQQAQQQ-YQQLENIQQQLQQQLAQSQQLCGFDSEPQASLQHLKAYIAQAQQASELYTQD 465

Query: 404  QLDELNQARQEIVSRREILKRDAEPQLALQQSLSDGRAQLKV--------------FERW 449
            Q+  L   +  I  +   L + A     L+Q L D   Q +                ERW
Sbjct: 466  QIIHLQIQQDSIEQQLHKLVQHAGDANQLEQKLRDLYQQREQQLERIYQFEQLQHQLERW 525

Query: 450  QQQGLEIAALEQKLTAAKTAGSELAEKHKQAIDAH-------KRLELSWHRGQAARLA-- 500
            Q   +E  +L+Q +   K   SE+ E H   ++         K  EL   + Q  RL   
Sbjct: 526  QIHYIEHQSLDQNIHQLK---SEIQELHNAMLEQQSAYEHDKKERELLQKQLQQQRLLFS 582

Query: 501  -------AELSPGEPCPVCGSLEHPEPAMGEFDLPSDEALAQAK-----QRESDALNLLH 548
                   A L P EPC VCGS +HP          S  A+ + +     Q+E +A N   
Sbjct: 583  ENIEQLRAALQPDEPCMVCGSQQHPYREQQHLLEKSLLAIQEQQEKNYLQKEQEAQNQWL 642

Query: 549  QARSEYKLLQQSLSNLQLS---------------------------------------AS 569
             AR +Y   +  LS+LQ                                           
Sbjct: 643  AARQQYLKQETVLSHLQQQQQYSLEQIQQLQQQLQHKYSFSGLELLWEQPPEQLLLKLGE 702

Query: 570  LLQEELGEAAGLSFD-----EHQARLAELSDGFERAKAA---QQSLAQLETQL------- 614
            L Q +L     L F+     + Q++  EL    E+ +A     Q L QL T +       
Sbjct: 703  LQQVQLKVREQLDFNITETQKTQSQYNELVRQLEKLRAQCIRAQQLQQLATPILKKLPSS 762

Query: 615  ERSEHQGRELQTALDEARAHYGKLA--EQLASDKGQYQQISAAIPQGFSDVATLSTAIAD 672
            + S+     LQ A    +    +L   EQL + KG  +Q++  +         L+T I  
Sbjct: 763  QHSDWHDNSLQEAQHIYQVFQNRLLQLEQLNTHKGSVEQLNLKLQPQQLQYQYLNTQIVQ 822

Query: 673  LTKTIDELKARQQSVRAAHAKAEQDNAAAKASLEAASRRLGEVN---ALAEQESLSFQQA 729
            L + +++LK  QQ +       E     A  + E A   L ++    ++ EQ  L  QQ 
Sbjct: 823  LEQELEQLK--QQGLDNVTQVKELTLKVAGQTYEQAQHWLDDLTQQLSILEQSCLEKQQY 880

Query: 730  L-----------------------ATSEFESVAAFEQACLTE-----------------A 749
                                       E+ ++ A  Q  L +                  
Sbjct: 881  FEGLQQNYQQQQSKISQFQATRQHVQQEYTNIYAQVQHWLNDHPDYSPELIEFLVLQDAT 940

Query: 750  EQAELSNQIKAFEQALITHQANLSQLQEA----LAGCEAPDM----SALEQQKMDAEQVM 801
            E+  +   I+A ++ L   +  L+ LQE     LA   A +     + LE  ++  E   
Sbjct: 941  EEQRIRQLIQANDRGLSEAKTALNTLQEQFEQHLATKPAHEFEQLQNLLENLEIQLEHTY 1000

Query: 802  QQALAQWQKVSARAAQLSQTQEQLKALDLKAGALEQQYAVVGTLADVANGNTGNKISLQR 861
            Q+      K+  +   L + Q+  K + ++    E +++ +  L   A+G    K++ + 
Sbjct: 1001 QERDQLRTKLEIQQHNLHKQQQFQKQI-VQVQQEEYRWSRISELIGSADGARFKKLAQEH 1059

Query: 862  FVLSVLLDDVLLE-ASHRLQLMSKGRYRLLRKEERAKGNKASGLELEVEDAYTAKVRSVA 920
             +      D+L+E A+ +LQ ++  RY+L R E+      + GL + ++     +VR V 
Sbjct: 1060 HL------DILVEYANQQLQPLAP-RYQLQRIED------SLGLAI-IDHHMNGEVRPVL 1105

Query: 921  TLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGFGSLDQDSLELAIRTLMDLQS 980
            +LSGGE+F+ +L++AL ++++    +G +K+++LFIDEGFG+LD  SL + +  L  LQ 
Sbjct: 1106 SLSGGETFLVSLALALAIANMA---SGSMKIESLFIDEGFGTLDPASLHVVMDALDRLQG 1162

Query: 981  AGRMVGVISHVTEMKEQIASRIDILKSAEG-SEIKLV 1016
             GR V +ISHV EM E+I  +I +     G S I++V
Sbjct: 1163 QGRKVTLISHVQEMHERIPIQIQVKAVGSGASRIQIV 1199