Pairwise Alignments

Query, 418 a.a., peptidase M23B (RefSeq) from Shewanella loihica PV-4

Subject, 648 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  119 bits (298), Expect = 3e-31
 Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 173 YLSAQRIGLNAGEIQRIETLLKEKLNFARDLRAGDRFSVLKSDQYIDGEVTGNSDILAIT 232
           Y +A   G+N   + ++  LL   ++F   L+  D      S +  DG+ T  S++L + 
Sbjct: 389 YRAALAYGMNQSMVSQLIKLLASSVDFQAQLKPTDTLEAFFSVEDADGKATDKSELLYVN 448

Query: 233 IERGRSTINAY-----QNSDGNFYDDQGRSLARAFQRVPLQKNYRVSSRFNRHRHHPVTG 287
            + G +    Y     +++  +++D+ G+S+ +   R P+  N R++S F   RH PV  
Sbjct: 449 AKFGDNETRFYRFQSPEDNSVDYFDENGKSIRQFLLRNPVP-NGRMTSGFGMRRH-PVLK 506

Query: 288 RTAPHNGTDFATPIGTKVIAPGDGIVSLVTDHRYAGKYVVIDHGNKYRTRYLHLSKAL-- 345
            +  H GTD+A   GT +IA G+G V         G   +I H N Y + Y H S     
Sbjct: 507 FSRMHTGTDWAAARGTPIIATGNGTVEKAGWASGYGNQTLIRHANGYVSSYNHQSAIAKG 566

Query: 346 VHKGQRVSRGQVIALSGKTGRITGPHLHYEFHINGRPVDPMKADIPMASKLSKKQMGEFA 405
           V +G +V +GQVI   G TG  TG HLHYE  +NG  VD MK  +P    LS   +  F+
Sbjct: 567 VTEGSKVRQGQVIGYVGSTGLSTGAHLHYELIVNGTKVDAMKVRLPGGKSLSGVALARFS 626