Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 553 a.a., RNA helicase from Ralstonia solanacearum UW163

 Score =  269 bits (687), Expect = 2e-76
 Identities = 161/438 (36%), Positives = 237/438 (54%), Gaps = 20/438 (4%)

Query: 14  LQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAM 73
           + FS+  L  +L+ ++  +G   PT IQ Q+IP  L G DL+A ++TG+GKT  F LP +
Sbjct: 1   MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60

Query: 74  QRVIATKALSKRDP-------RVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENF 126
            R+ A +      P       R L+L PTRELA QV   +R        K++ + GG   
Sbjct: 61  HRLSAAQPNKVHTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI 120

Query: 127 NDQAKALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQ 186
           N Q  AL R    VVATPGRL DH+ QR + L+ +ELL+LDEADRMLD+GF   +R I  
Sbjct: 121 NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN 180

Query: 187 AADHKRRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHK 246
               KR Q L+FSAT     I  +A  LL +P  + +   +   + + Q+IY  D    K
Sbjct: 181 ILPPKR-QNLLFSATFSD-DIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDR-ERK 237

Query: 247 EQLLTRLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFS 306
            +LL +L++     QV++FT T+   +RLA  L   G S  ++ G   Q+AR + + +F 
Sbjct: 238 RELLAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGISALAIHGNKSQSARTRALSEFK 297

Query: 307 RGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPK 366
            G  ++LV TD+A+RG+D+  +  V+NFD+P   E+Y+HRIGRTGRAGA+G+AISLV   
Sbjct: 298 AGTLRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVD 357

Query: 367 DWVNFKQVQNFLRKSFEFSELE----------ELAPKFKGLKDKPSQEKRLGKQQAKPKA 416
           +    + ++  +++    + LE          E  P  +     P Q    G+QQ +   
Sbjct: 358 EHGLLRDIERLIKRELPRTVLEGFEPDPTIAPEPIPNGRNNARGPRQGGGRGQQQPRQAN 417

Query: 417 KTAKAASSTKPTKPRDKR 434
             A       P +PR+ R
Sbjct: 418 GNAAPREPRAPREPREPR 435