Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 454 a.a., RNA helicase CrhR from Azospirillum sp. SherDot2

 Score =  281 bits (720), Expect = 2e-80
 Identities = 161/422 (38%), Positives = 245/422 (58%), Gaps = 7/422 (1%)

Query: 14  LQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAM 73
           + FS+  L   +L SLE      PT +Q  +IP  L GRD++A+++TG+GKT AF+LPA+
Sbjct: 1   MTFSELGLHPLVLKSLEAFEYTVPTPVQLAAIPPALQGRDILATAETGTGKTAAFMLPAL 60

Query: 74  QRVIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAKAL 133
            R           PRVL+L PTRELA QV    R      +   + ++GG  + +Q + L
Sbjct: 61  TRTAELPLNGAATPRVLVLAPTRELAKQVTDAARKYAKFMKLNIVDVVGGMPYREQLRLL 120

Query: 134 ARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHKRR 193
           +R    +V TPGRL DH+A+R + L+ +E+LILDEADRMLD+GF + +  I +      R
Sbjct: 121 SRPVDVLVCTPGRLLDHVARRRISLDEVEVLILDEADRMLDMGFLDDVETIAKCCP-PTR 179

Query: 194 QTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLTRL 253
           QT++F+ATLD  ++ ++A  LL+ PE VA+  S     ++ Q+++  D+L HK +LL   
Sbjct: 180 QTMLFTATLDR-RMAQLAGNLLRNPERVAV-ESQATAINVEQRLHHADDLDHKRRLLQHF 237

Query: 254 LQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQIL 313
              E   + IIF AT+ D D LA  L+  G + ++L G++ Q  RN+ + +   GQ ++L
Sbjct: 238 AAQEEVGKAIIFAATKRDADTLAEELSAAGHAAAALHGDMDQTKRNRTLQRLRTGQVRLL 297

Query: 314 VTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNFKQ 373
           V TDVA+RG+D+ +++ VINFD+P+ AE+Y+HRIGRTGRAGA G AIS     D     +
Sbjct: 298 VATDVAARGIDVRDITHVINFDLPRSAEDYVHRIGRTGRAGASGVAISFAARADRETLVR 357

Query: 374 VQNFLRKSFE---FSELEELAPKFKGLKDKPS-QEKRLGKQQAKPKAKTAKAASSTKPTK 429
           ++ + + + E      LE   P   G   +P+ +  R      KP  +  ++     P  
Sbjct: 358 IERYTKATLEVHVVPGLEPTRPFTTGGAGRPAGRSGRPSGGAGKPWHRNGESKGPHAPRG 417

Query: 430 PR 431
           PR
Sbjct: 418 PR 419