Pairwise Alignments

Query, 705 a.a., anaerobic ribonucleoside triphosphate reductase (RefSeq) from Shewanella loihica PV-4

Subject, 662 a.a., ribonucleoside-triphosphate reductase from Pseudomonas simiae WCS417

 Score =  138 bits (347), Expect = 1e-36
 Identities = 162/701 (23%), Positives = 285/701 (40%), Gaps = 101/701 (14%)

Query: 6   KRDGYRTPFDETRIRDAVVAAASSAGIDDVAYATEVALQVRQSVAELEQVDIHDLQDAVE 65
           KRDG   PFD  +IR A++AA ++        A  +   V   +  +EQ+D+  +QD+VE
Sbjct: 15  KRDGSLAPFDAEKIRQALIAAGTATAEFQANDADLLLGAVLARLRGIEQLDVELIQDSVE 74

Query: 66  NQLMEGPYKQLARVYIEYRHDRDIHRELSSRLNREIRGLVEQSNAALLNENANKDSKVIP 125
             LM+  Y Q  R YI       ++RE   R+ R+ + LVE   A  +NE  +++   + 
Sbjct: 75  RVLMDAGYFQSMRAYI-------VYREQHGRMRRDRKTLVEV--ATSMNEYLDREDWRVQ 125

Query: 126 TQRDL----------LAGIVAKHYATRHILPKDVVAAHESGEIHYHDLDYAPFFPMFNCM 175
              +           +AG V  +Y    +  + +  AH   ++H HDLD    +    C 
Sbjct: 126 ANANQGYSLGGLVLNVAGKVTANYWLDEVYSEQIGRAHREADLHIHDLDMLAGY----CA 181

Query: 176 LIDLAGMLTHGFK--MGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 233
              L  +L  G     G  E   PK +S+A       +  + +   G    +  D  LAP
Sbjct: 182 GWSLRSLLHEGLNGVPGRVEAGPPKHLSSALGQMVNFLGTLQNEWAGAQAFSSFDTYLAP 241

Query: 234 FVAKSYDKHYQVALTWGITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFV--- 290
           +V K    + QV     + +        +       F +L ++         Q P +   
Sbjct: 242 YVRKDQLSYPQV--RQAVQEFIYNLNVPSRWGTQTPFTNLTFDWVCPEDLREQVPVIGGE 299

Query: 291 --TFGFGLGTSWESRLIQSSMMKVRMTGLGKNRKTAVFPKLVFAI--------------- 333
              F +G     E  LI  + ++V   G  K R    FP   + I               
Sbjct: 300 EMPFAYG-DLQAEMELINRAYIEVMQAGDAKGR-VFTFPIPTYNITHDFPWDSDNADRLF 357

Query: 334 ----RDGINHKAGDCNYDIKQMALKCASMRMYPDILNYEQVEKVTGSFKTPMGCRSFLGT 389
               R G+ +     N D++   ++    R+  D+   E +++  G F          G+
Sbjct: 358 EMTARYGLPYFQNFLNSDMQPNQVRSMCCRLQLDV--RELLKRGGGLF----------GS 405

Query: 390 YEEEGELVHEGRNNLGVVSLNLPRIAIEAKGDETRFYQLLDERLAVARRALDTRIERLQ- 448
            E+ G        +LGVV++N  R+    KGD +   Q LD  + +A  +L+ + + +Q 
Sbjct: 406 AEQTG--------SLGVVTINCARLGYLFKGDTSGLLQRLDSLMEMAMESLEVKRKVIQH 457

Query: 449 GVKARVAPILYMEGACGVRLRADDEISGIFKNGRASISLGYIGLHETINALYGSETHVYD 508
            + A + P                   G  +N  ++I L   G+HE +      E  ++ 
Sbjct: 458 HMDAGLYPY-------------TKRYLGTLRNHFSTIGLN--GMHEMLRNFSADEEGMH- 501

Query: 509 SEALRGKALAIIEHLKAATVRWREESGYGFSLYSTPSENLCSRFCKLDTEAF-GVIDGVT 567
           +E  R  AL +++H++A  +R++E++G+ ++L +TP+E    RF K D + +  ++   +
Sbjct: 502 TEQGRAFALKLLDHVRATLLRFQEDTGHLYNLEATPAEGTTYRFAKEDRKRYPNILQAGS 561

Query: 568 D-RGYYTNSFHLDVEKKVNPYDKLDFEQPYPALTSGGFICYGEYPNMQHNIEALEDVWDY 626
           D   YYTNS  L V    +P++ L+ +       +GG + +        + +A + +   
Sbjct: 562 DIAPYYTNSSQLPVGFTQDPFEALELQDELQCKYTGGTVLHLYMAEQISSTQACKQLVRK 621

Query: 627 SYS--RVPYYGTNTPIDECYDCGF-TGEFSCTSKGFTCPKC 664
           +    R+PY         C   G+  GE         CPKC
Sbjct: 622 ALGRFRLPYLTVTPTFSICPVHGYLAGEHE------FCPKC 656