Pairwise Alignments

Query, 1141 a.a., chromosome segregation protein SMC (RefSeq) from Shewanella loihica PV-4

Subject, 1171 a.a., Chromosome partition protein smc from Variovorax sp. SCN45

 Score =  644 bits (1661), Expect = 0.0
 Identities = 435/1193 (36%), Positives = 643/1193 (53%), Gaps = 76/1193 (6%)

Query: 1    MRLTQIKLAGFKSFVDVTKIPFNQPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60
            +RL  IKL+GFKSF + T       L  ++GPNGCGKSN++DAVRWVLGES A  LRG+S
Sbjct: 1    VRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES 60

Query: 61   MADVIFNGSSARRPVSVASVELSFDNQQGRLGGQYASYQAIAVKRQVSRDGESSYFLNGQ 120
            M DVIFNG++ R+  S +SVEL FDN   R GGQ+  +  IAV+R ++RDG SSY++N Q
Sbjct: 61   MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWNQFGEIAVRRVLTRDGTSSYYINNQ 120

Query: 121  KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQELRVFIEEAAGISRYKERRRET 180
              RR+D+ D+F+GTGLGPR+YAII QGTISR+IESKP+ELR+F+EEAAG+S+YKERRRET
Sbjct: 121  PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET 180

Query: 181  ENRIRHTRENLERLGDIRQELGRQIDKLAEQAEAARQYRALKQTERDQHAQLEVAKYLEL 240
            ENR+  TRENL R+ DI +EL   ++KL +QAE A +Y  L+     +  QL   K  E 
Sbjct: 181  ENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNLLQGDATKKQHQLWFLKRSES 240

Query: 241  SAQSDKLSQEIEAKTLTQSEGDAGREALSRNLTEIKLKLDELERQEQQQVEAFYLNGNQI 300
            +A   K+  + E          A    +   L  ++        Q  Q     Y    ++
Sbjct: 241  NADQAKIKADSEKAINDLESRTADLRRIESELETVRQAHYGAGDQVNQAQGKLYEASAEV 300

Query: 301  AKLEQEVKHRQQQDAHLKQRIKQDEEKLALL-----KAQEQALILARGDLDERQHGAREA 355
             +LE E++   +    ++QR+ Q  E++        +A+ +   LA   +D     A E 
Sbjct: 301  GRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGRRREEAEAEIETLAGAGVD-----AEEQ 355

Query: 356  HQALQLQLELLDEQLGEVELSLEQAQEAESQAKQAVNQCQLRLELTKGELKHKQSALAQV 415
               L  QLE  D ++ E+E ++++AQ+  +  +  V+Q Q ++++   + ++ +    Q+
Sbjct: 356  AILLAAQLEEHDARMPELEEAVQRAQDQANAQRTTVSQVQQQIQVLAADQRNIEEQSRQL 415

Query: 416  KSQHQSASRQLEQLSHQDETDNLAL--QHAQCERLAE----RLDELKGEI-----ELGAA 464
              + +        L+  DE   L +  QHA  +  A     RL EL+  +     +  A 
Sbjct: 416  TQRSERLRADQNALAAPDEARLLDMQEQHAAAQEAASESDARLQELQETVPQLDDDRRAR 475

Query: 465  TQSQRQEQARQTQ--AQVEALS--QSLAEERGRLA--VVKRILPQEDALQGRALWQAIQV 518
             Q+   E AR  +  A+++AL   Q   +  G+LA  + K  L   D LQG  LW  I +
Sbjct: 476  QQAVNTEGARHAEFSARLDALRALQEKVKTDGKLAPWLAKHGL---DGLQG--LWSRIHI 530

Query: 519  TPGWEAAVDLLLDGLL----------------------TQKVSDKHSGMETENESGFELS 556
              GWE+A++  L   L                          S   +G+     +   LS
Sbjct: 531  EQGWESALEAALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPAAGVPESAAALPRLS 590

Query: 557  RSQKWTGLSSEVNLAPWLSRLNWADSLSQAKAMLGSIEDDERIVTADGYIVGN---GFVL 613
               +      +  L  WL     ADS  +A A   +++  E I    G+ V +    F  
Sbjct: 591  SLLRLNDAGQQALLTGWLHGCYTADSFEEALAQRATLQPGEVIYVKSGHAVSSHSVNFYA 650

Query: 614  QKAEQGRQLVQLKAEQQALELSIAASVEAIDERRAVLAEVNQALDEQREALTQLNTSLQG 673
              +EQ   L + + E + LE  + A     +E R  L     A  +  + L         
Sbjct: 651  PDSEQAGMLAR-QQEMENLERQLRAQTLINEEARTALVRAEAAYADAAQRLVTARREAAE 709

Query: 674  TQLERERLMAQAQATQERIAQQGEQQARLKALLEEQIGELEAVEQSLSELTSRRDQDEAQ 733
            TQ     L    Q    R+ Q  EQ       L   +GE++A    L EL  RR   E +
Sbjct: 710  TQSRAHEL----QVETLRMTQLAEQTRARSQQLAADLGEVDA---QLEELQERRISAEGR 762

Query: 734  LTELTRSADSQVAGLADRRAQHK----ALGRERQALALQSQQLQ-QSLQAINTEQALSRQ 788
              EL    D Q+A   +R A+        GR   A   Q + L+ Q+ +A  +++ L  +
Sbjct: 763  FEEL----DMQLADSQERHAELDERVIEAGRALNASREQHRSLERQAQEATFSQRTLEAR 818

Query: 789  QGEQLERQMKELAQELSELQGQLEGQDKLDGKLQADAMAAQLNDALARQGEVQAALDALR 848
            +GE L R ++  AQ++  L  + E       +L   A  A L DALA + E +AAL + R
Sbjct: 819  RGE-LNRSIETAAQQVVSLTDEDERARAELSRLSDAAAQAGLQDALALKLEREAALGSAR 877

Query: 849  LQQAELQNQADEIGAKQKQQLGKLEHLTQAISALKLRREGIKGQIDSQLAQIRSQEVDIA 908
             Q  +L  +      ++ Q   +L+ L Q I+  +L+ +  +  ++     +     D+ 
Sbjct: 878  SQYDDLTLKLRASDERRLQLERELDPLRQRITEFQLKEQAARLGVEQYQQLLDDAGADLE 937

Query: 909  EVQATLDL-TVSLSHRQKTLERTKAQIEHLGAINLAAIEEFEQQSQRKAYLDSQDADLAK 967
             ++ +++   V L+  Q  ++R   ++  LGA+NLAA++E    S+RK +LD+Q ADL +
Sbjct: 938  AIEQSIETDKVRLTGLQSEIDRLNREVVALGAVNLAALDELAIASERKIFLDAQSADLNE 997

Query: 968  ALGSLEEAIRKIDRETKTRFKETFDKVNQDLGVLFPKVFGGGSAYLALTDDDLLETGVTI 1027
            A+G+LE+AIRKID ET+     TF  VN     +FP++FGGG+A L +T D++L++GV +
Sbjct: 998  AIGTLEDAIRKIDAETRDLLGGTFKIVNDHFSRMFPELFGGGNAKLMMTGDEILDSGVQV 1057

Query: 1028 MARPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVDRFCRL 1087
            MA+PPGKKN TIHLLSGGEKALTA++LVFAIF+LNPAPFC+LDEVDAPLDDAN +R+ +L
Sbjct: 1058 MAQPPGKKNQTIHLLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKL 1117

Query: 1088 VKEMSQSVQFVYISHNKITMELADQLIGVTMHEPGVSRIVAVDIDEAVALADA 1140
            V  MS+  QF++ISHNKI ME+A+QLIGVTM E GVSRIVAVD++ A ++  A
Sbjct: 1118 VTAMSRETQFLFISHNKIAMEMAEQLIGVTMQEQGVSRIVAVDMEAAASMVAA 1170