Pairwise Alignments

Query, 1141 a.a., chromosome segregation protein SMC (RefSeq) from Shewanella loihica PV-4

Subject, 1155 a.a., chromosome segregation protein from Agrobacterium fabrum C58

 Score =  419 bits (1076), Expect = e-121
 Identities = 357/1214 (29%), Positives = 565/1214 (46%), Gaps = 132/1214 (10%)

Query: 1    MRLTQIKLAGFKSFVDVTKIPFNQPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60
            M+  ++++ GFKSFV+ ++      LT ++GPNGCGKSN+++A+RWV+GE+S K++R   
Sbjct: 1    MKFNKLRVVGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60

Query: 61   MADVIFNGSSARRPVSVASVELSFDNQQGRLGGQYASYQAIAVKRQVSRDGESSYFLNGQ 120
            M DVIF+GS  R   + A V L  DN        +     I V R++ R+  S Y +NG+
Sbjct: 61   MDDVIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDADEIQVTRRIERENGSVYRINGK 120

Query: 121  KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQELRVFIEEAAGISRYKERRRET 180
            + R KD+  LF     G RS +++ QG I  LI +KPQ  R  +EEAAGIS    RR E 
Sbjct: 121  EARAKDVQLLFADASTGARSPSMVGQGRIGELINAKPQARRQLLEEAAGISGLHSRRHEA 180

Query: 181  ENRIRHTRENLERLGDIRQELGRQIDKLAEQAEAARQYRALKQTERDQHAQLEVAKYLEL 240
            E R+R    NLERL D+  +L  QI+ L  QA  A +++ L    R + A L   +++E 
Sbjct: 181  ELRLRAAETNLERLEDVTAQLESQIESLKRQARQANRFKMLSADIRAREATLLHIRWVEA 240

Query: 241  SAQSDKLSQEIEAKTLTQSEGDAGREALSRNLTEIKLKLDELERQEQQQVEAFYL----- 295
                 +    +   T   +E   G+   ++      LKL EL   E +   A        
Sbjct: 241  KEAEGEAESALNQATNIVAEKAQGQMEAAKQQGIASLKLPELREDEARVAAALQRLQIAR 300

Query: 296  -----NGNQIAKLEQEVKHRQQQ---DAHLKQRIKQDEEK-LALLKAQEQALILARGDLD 346
                   N++ +   E+  R  Q   D   ++R+  D  + LA L  +E  L+    D  
Sbjct: 301  TQLDDEANRLLRRRDELARRLSQLGEDIVREERLVADNAQILARLDEEEAELLDILSDSG 360

Query: 347  ERQHGAREAHQALQLQLELLDEQLGEVELSLEQAQEAESQAKQAVNQC---QLRLELTKG 403
                  REA +A  ++L   +     +     +A     Q ++A+      +LRLE    
Sbjct: 361  RHADEMREAFEAAAVKLAESEAVFTSITAERAEAAAGRQQLERAIRDLSDRKLRLE---- 416

Query: 404  ELKHKQSALAQVKSQHQSASRQLEQLSHQDETDNLALQHAQCERLAERLDELKGEIELGA 463
              +  Q A A++ +  +  S   +    ++  +   +       +AE         E  A
Sbjct: 417  --RQSQEASAEIDTIDEKLSGLPDPAERREAVEAAEIAVEDALIVAE---------EAEA 465

Query: 464  ATQSQRQEQARQTQAQVEALSQSLAEERGRLAVVKRILPQEDALQG--RALWQAIQVTPG 521
            A    R  +A   +  +E     L         + ++L    A  G    + + + V  G
Sbjct: 466  AVAEARSAEA-LARGPLETAKNRLNALDTEARTITKMLATSAAANGSFTPVAEEMTVERG 524

Query: 522  WEAAVDLLLDGLLTQKVSDKHSGMETENESGFELSRSQKWTGLSSEVNLAP-----WLSR 576
            +EAA+   L   L   +          N +G +     +      +   AP      L++
Sbjct: 525  YEAALGAALGDDLESPLDASAPAYWGGNGNGADDPGLPQGAKPLLDYAQAPDALRRALAQ 584

Query: 577  LNWADSLSQAKAMLGSIEDDERIVTADGYIV----------GNGFVLQKAEQGRQLVQLK 626
            +     +S+A+ +L S++  +R+VT +G +             G    +  Q  +L +++
Sbjct: 585  IGVVADVSEARRLLPSLKAGQRLVTREGALFRWDGHIASADAPGAAALRLSQKNRLAEIE 644

Query: 627  AE-------QQALELSIAASVEAIDERRAVLAEV-------NQALDEQREALTQLNTSLQ 672
            AE        +  E  +AA  E I      L+EV        + L E REALT    +  
Sbjct: 645  AELDEARSILEEAEDQLAAKTEDIRSSELRLSEVRDRSRLATRQLAEAREALTSAERA-S 703

Query: 673  GTQLERERLMAQAQ----ATQERIAQQGEQQARLKALLEEQIGELEAVEQSLSELTSRRD 728
            G  L R  ++++AQ    A  + IA Q E+ AR++    E   +L  ++  L E      
Sbjct: 704  GDLLRRRDVVSEAQNQIGAQIDEIAVQ-EENARIEM---EDAPDLSVLDLRLRE------ 753

Query: 729  QDEAQLTELTRSADSQVAGLADRRAQHKALGRERQALALQSQQLQQSLQAINTEQALSRQ 788
                  ++L  + D  +  LA+ RA+H+ + RE ++   + Q + Q      +  A +  
Sbjct: 754  ------SQLEVATDRGL--LAEARARHEGVSREAESRQRRIQAIGQERSTWASRAASAAD 805

Query: 789  QGEQLERQMKELAQELSELQGQLEGQDKLDGKLQADAMAAQLNDALARQGEVQAALDALR 848
                L  + +E  +E++EL    E  D+    L        LN+    +   +AA D  R
Sbjct: 806  HIATLREREEEAREEIAELDIAPEEFDEKRRNL--------LNELQKTEDARRAAAD--R 855

Query: 849  LQQAE-LQNQADEIGAKQKQQLGKLEHLTQAISALKLRREGIKGQIDSQLAQIRSQEVDI 907
            L +AE LQ  AD + A              A+S L   RE  +G+ + +L   R + ++ 
Sbjct: 856  LAEAENLQRAADRVAA-------------TALSELAEAREK-RGRAEERLVSAREKRLET 901

Query: 908  A-EVQATLDLTVSLSHR----------------QKTLERTKAQIEHLGAINLAAIEEFEQ 950
               ++ TL+    ++ R                ++ L+R K + E LGA+NL A EE  +
Sbjct: 902  EHRIRETLNTEPHMAFRLTGLGPDQPKPDIRDVERDLDRLKIERERLGAVNLRAEEEQAE 961

Query: 951  QSQRKAYLDSQDADLAKALGSLEEAIRKIDRETKTRFKETFDKVNQDLGVLFPKVFGGGS 1010
             S +   L  +  D+  A+  L   I+ ++RE + R    FD VN     LF  +FGGG+
Sbjct: 962  LSGKLEALIKERDDIIDAVRKLRAGIQSLNREGRERLIAAFDVVNSQFQRLFTHLFGGGT 1021

Query: 1011 AYLALTD-DDLLETGVTIMARPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCML 1069
            A L L + DD LE G+ I+ARPPGKK  T+ LLSGGE+ALTA++L+FA+F  NPAP C+L
Sbjct: 1022 AELQLIESDDPLEAGLEILARPPGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVL 1081

Query: 1070 DEVDAPLDDANVDRFCRLVKEM--SQSVQFVYISHNKITMELADQLIGVTMHEPGVSRIV 1127
            DEVDAPLDD NV+R+C L+ EM  S   +FV I+HN ITM   ++L GVTM E GVS++V
Sbjct: 1082 DEVDAPLDDHNVERYCNLMDEMVASTETRFVIITHNPITMARMNRLFGVTMAEQGVSQLV 1141

Query: 1128 AVDIDEAVALADAV 1141
            +VD+  A  L +AV
Sbjct: 1142 SVDLQTAEQLREAV 1155