Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 245 a.a., DNA polymerase III subunit epsilon from Pectobacterium carotovorum WPP14

 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 19/186 (10%)

Query: 44  LAIDLEMTGLNA-----SFDQILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQSA-TIHG 97
           + +D E TG+N         +I+ IG V +   +L      H  ++ +  V   A  +HG
Sbjct: 9   IVLDTETTGMNKLGVHYEGHKIIEIGAVEVINRRLT-GRHFHVYIKPDRLVDPEAYNVHG 67

Query: 98  ILDTHLDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLLAI--- 154
           I D  L    T    +  FL    G  LV H+A  D+ F+    +    + P+       
Sbjct: 68  ISDEFLADKPTYADIVDDFLDFIRGAELVIHNATFDIGFMDYEFRLLNRDLPKTETFCKI 127

Query: 155 -DTLLLEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLLAQVAAM 213
            D+LL+ ++    ++  L   C R     ++  L     H AL+DA    E+ LA     
Sbjct: 128 TDSLLMARKIFPGKRNSLDALCDRYQIDNSKRTL-----HGALLDAEILAEVYLAMT--- 179

Query: 214 GGATKV 219
           GG T +
Sbjct: 180 GGQTSL 185