Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 46  IDLEMTGLNASFD------QILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQSATIHGIL 99
           +D E TG+N          +I+ IG V +   +L        +  ++    ++ T+HGI 
Sbjct: 13  LDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITVHGIT 72

Query: 100 DTHLDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLL----AID 155
           +  +       Q    FL   +G  +VAH+A  D++F+           P+       +D
Sbjct: 73  NEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDICQVLD 132

Query: 156 TLLLEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLLAQVAAMGG 215
           +L + K     Q+ +L   C R G   +R  L     H AL+DA    ++ L      GG
Sbjct: 133 SLEIAKFLHPGQKNNLDALCKRYGIDNSRREL-----HGALLDAEILADVYLIMT---GG 184

Query: 216 ATKVKIAELLP 226
            TK +++   P
Sbjct: 185 QTKFELSNEKP 195