Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 204 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 43  LLAIDLEMTGLNA-SFDQILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQS-ATIHGILD 100
           ++ +D E TGL+    D+ + IG V ++QG ++  +   +L+    +V    A   GI +
Sbjct: 6   IVVLDFETTGLSPLQGDRAIEIGAVKLQQGVVV--DRFQQLMNPGFAVSSFIADYTGITN 63

Query: 101 THLDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLLAIDTLLLE 160
             L  A + E  MA F    +G  LVAH+A  D  FL +       E+ +  A   LL  
Sbjct: 64  AMLSDAPSCETVMADFADFIQGCHLVAHNASFDQKFLTAEFARIDLEQSQPFACSLLL-- 121

Query: 161 KQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLLA 208
            +RL +   + Q G L      A  G+     H AL DA   G L LA
Sbjct: 122 ARRLFQAVPNHQLGTLVNYLGIANDGV----FHRALNDAEVTGALWLA 165