Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 244 a.a., DNA polymerase III subunit epsilon from Dickeya dianthicola 67-19

 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 19/186 (10%)

Query: 44  LAIDLEMTGLNA-----SFDQILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQSA-TIHG 97
           + +D E TG+N         +I+ IG V +   +L      H  ++ +  V   A  IHG
Sbjct: 9   IVLDTETTGMNKLGVHYEGHKIIEIGAVEVINRRLT-GRHFHVYLKPDRLVDPEAYNIHG 67

Query: 98  ILDTHLDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPR----LLA 153
           I D  L    T    +  FL    G  LV H+A  D+ F+    +    + P+       
Sbjct: 68  ISDEFLADKPTYGDVVDEFLDFIRGAELVIHNAAFDIGFMDYEFRLLRRDIPKTETFCTI 127

Query: 154 IDTLLLEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLLAQVAAM 213
            D+LL+ ++    ++ +L   C R     ++  L     H AL+DA    E+ LA     
Sbjct: 128 TDSLLMARRLFPGKRNNLDALCDRYQIDNSKRTL-----HGALLDAEILAEVYLAMT--- 179

Query: 214 GGATKV 219
           GG T +
Sbjct: 180 GGQTSL 185