Pairwise Alignments

Query, 390 a.a., NnrS family protein (RefSeq) from Shewanella loihica PV-4

Subject, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  211 bits (537), Expect = 3e-59
 Identities = 135/383 (35%), Positives = 198/383 (51%), Gaps = 27/383 (7%)

Query: 16  LLRLGFRPFFLFGALFSLVALALWGSFLTGRLGFTPHGNPLWWHGHEMLFGFVMAIVAGF 75
           LL  GFRPFFL   LF+LVA+A+W +   G +      + + WH HEMLFG+  A++AGF
Sbjct: 15  LLSRGFRPFFLGAGLFALVAIAVWPAVFLGEVILPTQFSAVEWHAHEMLFGYGAAVIAGF 74

Query: 76  LLTASQTWTGQKSIKGWPLGALFLLWLAPRILLANNQWGSFEVVAMLDLLFAPAAALVLA 135
           LLTA   WTG+  + G  LG+L LLW A R  +  +    +   A++D+ F    ALV+A
Sbjct: 75  LLTAIPNWTGRLPVAGKALGSLALLWFAGRAAVLVSTRIGWATAAVIDVAFLVVFALVVA 134

Query: 136 RQVIAVKQWRNFAFIPILLLLTVANALSYYGVSSQNSLLVSHAFHGATILMVTIVALIGG 195
           R++ A K WRN   I ++ LL  AN    + + +  +    HA   A  L+V ++ L GG
Sbjct: 135 REIAAGKNWRNLKVIAVVGLLAGANLA--FHLEAHFTGDADHAGRAALALIVFLILLFGG 192

Query: 196 RVIPFFT----------DRATQWQRLDNISWLEKLTFVSLMALFIAMLIGQSLAIMLCAA 245
           RV+P FT           R   + R D  ++   L+ ++L+A       G +   +L A 
Sbjct: 193 RVVPSFTGNWLARRGEAKRPAPFDRWD--AYALALSALALVAWIAFPDKGLTGLALLAAG 250

Query: 246 VAGITLLVRWSRWGVQSTFGVPLLWSLHLSYLCIPVGLLLIAVGASV--------SAGLH 297
           +A +  L RW  W    TF  PL+  LH ++L + +G L  A GAS         + GLH
Sbjct: 251 LASLARLARWRGW---RTFADPLVLVLHGAFLLVALGFL--AAGASALMPDQVPPAIGLH 305

Query: 298 AMTVGGLGGMILAMMARVSLGHTGRNLLPPKVMTGAFALILISTITRVLASLFPAQFMLW 357
              +GG+GGM LAMM R +LGH+G+ L         + L+  + + R+  +L P      
Sbjct: 306 IWGIGGIGGMTLAMMTRATLGHSGQALAATPGTVAVYLLVAAALMARIAMALLPEWTAPL 365

Query: 358 LTIALVAWIFAFGTFVICYAPIL 380
           + +A   W  AF  FVI Y P+L
Sbjct: 366 MLVAAFCWCAAFAGFVIIYWPML 388