Pairwise Alignments

Query, 403 a.a., tryptophan synthase subunit beta (RefSeq) from Shewanella loihica PV-4

Subject, 406 a.a., tryptophan synthase beta subunit from Agrobacterium fabrum C58

 Score =  426 bits (1095), Expect = e-124
 Identities = 217/386 (56%), Positives = 273/386 (70%), Gaps = 1/386 (0%)

Query: 6   DPYFGEYGGMFVPQILMPALKQLEAAFVDAQNDPSFQAEFTDLLKNYAGRPTALTLTRNL 65
           D  FG YGG FV + LMP +  L+A +  A++DP FQAE   L  +Y GRP+ L     L
Sbjct: 17  DGRFGIYGGRFVAETLMPLILDLQAEWDKAKSDPEFQAELKYLGTHYTGRPSPLYFAERL 76

Query: 66  SPN-PLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACA 124
           +      KIY KRE+L H G+HK N  LGQ LLAKRMGK  IIAETGAGQHGVA+A   A
Sbjct: 77  TAELGGAKIYFKREELNHTGSHKINNCLGQILLAKRMGKTRIIAETGAGQHGVASATVAA 136

Query: 125 LLGLKCKVYMGAKDVERQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSASYDKA 184
             GL C VYMGA DV RQ+PNVFRM+L+GAEV PVT+G  TLKDA NEA+RDW  + D  
Sbjct: 137 RFGLPCVVYMGATDVARQAPNVFRMKLLGAEVKPVTAGHGTLKDAMNEALRDWVTNVDDT 196

Query: 185 HYLLGTAAGPHPFPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADF 244
           +YL+GTAAGPHP+P +VR+FQ +IGEE KAQ+LE EGRLPD +IA VGGGSNAIG+F  F
Sbjct: 197 YYLIGTAAGPHPYPEMVRDFQAVIGEEAKAQMLEAEGRLPDMIIAAVGGGSNAIGIFHPF 256

Query: 245 IDEPSVKLIGVEPAGLGIDTPKHGAPLKHGKTGIFFGMKAPLMQDKEGQIEESYSISAGL 304
           +D+ +V+++GVE  G G+   +H A +  G  G+  G +  L+QD +GQI+E +SISAGL
Sbjct: 257 LDDKNVRIVGVEAGGKGLSGEEHCASITAGSPGVLHGNRTYLLQDGDGQIKEGHSISAGL 316

Query: 305 DFPSVGPQHAHLAATGRATYESATDDEALAAFQLLARSEGIIPALESAHALAYAIKLAEA 364
           D+P +GP+H+ L   GR  Y    D EAL AFQ+L R EGIIPALE +HALA  IK A  
Sbjct: 317 DYPGIGPEHSWLNDIGRVEYVPIMDHEALDAFQMLTRLEGIIPALEPSHALAEVIKRAPK 376

Query: 365 ATEETLLVVNLSGRGDKDIFTVADIL 390
             ++ ++++NLSGRGDKD+ TV+  L
Sbjct: 377 MGKDEIILMNLSGRGDKDVHTVSKFL 402