Pairwise Alignments

Query, 1113 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Shewanella loihica PV-4

Subject, 630 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  357 bits (915), Expect = e-102
 Identities = 189/390 (48%), Positives = 256/390 (65%), Gaps = 9/390 (2%)

Query: 1   MSYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAK 60
           MSY VLARK+RP  F ++VGQ HV+ AL+NAL+  RLHHAYLFTGTRGVGKT+++R+ AK
Sbjct: 1   MSYVVLARKYRPRNFTEMVGQGHVVQALSNALTTQRLHHAYLFTGTRGVGKTTVSRILAK 60

Query: 61  GLNC-----EQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRP 115
            LNC     + G+TA PCG C +C +I  GRFVD  E+DAAS   VD+ + LL+   Y+P
Sbjct: 61  SLNCLGSDGQGGITAEPCGVCQACTDIDSGRFVDYTELDAASNRGVDEVQALLEQAVYKP 120

Query: 116 TRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNL 175
            +GRFKV++IDEVHML+ ++FNA+LKTLEEPPE++KF+LATTDPQ++PVTVLSRCLQFNL
Sbjct: 121 VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL 180

Query: 176 KSLTLDEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLT 235
           + +  + +   L  +L  EQV  D  A++LL++AA GSMRDALSLTDQAIAFG GQ++  
Sbjct: 181 RPMAPETVLEHLQQVLQAEQVTADAQALRLLSRAARGSMRDALSLTDQAIAFGGGQLQEA 240

Query: 236 QVQTMLGTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLT 295
            V+ MLG +D  +V+ L+ AL  GD   ++     +   G +    L  +  +L ++ + 
Sbjct: 241 AVRQMLGAVDRSYVLRLIDALARGDGATVVDTVDALRVNGLNAASTLEEMTGVLQRMAVL 300

Query: 296 QFAPSAAQLSQYAE----QIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMAL 351
           Q  P  AQ     +    QI   A+ L  ++ QL Y L L+GR +L  APD  + L M L
Sbjct: 301 QAVPDRAQAEGVNDPDEAQIARLAQSLPADETQLLYSLCLHGRGELGLAPDEYAALTMVL 360

Query: 352 LRAIAFVPEAPVQRWMGEAGSEILLPDTPL 381
           LR +AF P   V          +   +TP+
Sbjct: 361 LRLMAFKPAGTVSPSAAAEKKTLKSAETPV 390