Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  198 bits (504), Expect = 4e-55
 Identities = 122/355 (34%), Positives = 194/355 (54%), Gaps = 4/355 (1%)

Query: 148 SVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAADG--DLTGRLNFFEVKDEFS 205
           S VI ++VA++ +I L    I   +   L+T   A++  A+G  DLT RL+     DEF 
Sbjct: 272 SAVIATVVAVVIIIGLLGLLIRVLMQ-PLHTMTRAMEDIAEGEGDLTKRLHIHS-HDEFG 329

Query: 206 ILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQHLDSLATAME 265
           +L  + +  VER H  +  ++ A+ Q+  V       +    T + EQ    +S+A A+ 
Sbjct: 330 VLGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAIN 389

Query: 266 EMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGDASTAVNTLND 325
           E+ AA +E+A NA Q+S     A    E G + +   + A+  L++ I  +S  + TLN 
Sbjct: 390 ELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNS 449

Query: 326 NAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVE 385
               I +++  I +IS+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +  +
Sbjct: 450 KTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQ 509

Query: 386 IKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERVYEMSVLIATS 445
           +++MIE LQ G+      M+++   +QD  Q   + GE L ++      +  M+  +AT+
Sbjct: 510 VQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATA 569

Query: 446 AEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLDQLLVGLKV 500
            EEQ+AV   I  ++ EI   + +  ++   ++  C +L   A +L  L+   ++
Sbjct: 570 TEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624