Pairwise Alignments

Query, 760 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 446 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 3e-33
 Identities = 94/266 (35%), Positives = 139/266 (52%), Gaps = 17/266 (6%)

Query: 482 LAQHTYQRN--VWLGGLSVLFIILLLLVNRHHQRKINASLNQNIQSQRELIQAVAHEFRS 539
           L Q TYQ+N    L      F +L    N     K+ A L   I SQR+L++ V+HE RS
Sbjct: 188 LGQTTYQQNSLARLAARRDEFGVLAKDFN-----KMGARLQSTIGSQRQLLRDVSHELRS 242

Query: 540 PLARVQLAFDMLEEQFEQDKPTRLIDTINKGLSELEKLIKEALDFIQIESKSRPLHLSQV 599
           PLAR+++A   L E+ E ++   L   + +    LE LI E L   +++++    H   V
Sbjct: 243 PLARLRIAL-ALAERAEPEQRQALWPRLTRECDRLEDLISEILALARVDAEQ--AHAEPV 299

Query: 600 NLNKLLGELMDANSVLYPDKTFKLEVNPSEACLVKADSTQIARAFSNILRNAARF--ARS 657
           +LN LLG +     +  PD+  +LE  P  +  ++   T I RA  N+LRNA RF  A  
Sbjct: 300 DLNALLGSVRKDALLSAPDQDVRLEAQPGLS--LQGWPTLIERAVDNLLRNALRFNPAGQ 357

Query: 658 QVLISLKQEKSRILVIIEDDGPGIPTEQRERVFEPFVRLDQSRCRDSGGIGLGLALAKKI 717
            V +S  +E+ RI++ + D GPG   E   ++ EPF R   +  +++ G GLGLA+A+K 
Sbjct: 358 PVEVSAAREQDRIVISVRDHGPGAAEEHLAQLGEPFFR---APGQEAPGHGLGLAIARKA 414

Query: 718 CEAHGGALTISASQLGGAKLSLACPL 743
            E HGG+L +     GG    L  PL
Sbjct: 415 AERHGGSLMLENHPQGGFVARLELPL 440