Pairwise Alignments

Query, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 307 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 5/268 (1%)

Query: 27  LGSAILMGTIGALARTANLEASIITFYRLLIGAACLIAYMLATGKARQ--ILHRPGKRHL 84
           + + ++ GTIG     +      + F+R + GA  L+A   A G  R   I        +
Sbjct: 13  VAAMLISGTIGWFVLVSGQPVLDVVFWRCVFGAVTLLAICAAFGFLRPGVISRTAFLLAI 72

Query: 85  FNGAMLAGFMVFYVQSIGYINMANAVMLIYLAPLVSAIGAHFLFHERLTRQDLLAIGIAL 144
            +G  + G  +    S    ++A    +  + P +    A     E++T   +  + +A 
Sbjct: 73  ASGVAIVGNWLLLFASYARASIAIGTAVYNVQPFMLVGLAALFLGEKITLAKVTWLSVAF 132

Query: 145 IGVVAILPSLESLTGSTAE--LKGYGFALLALLSYSGFMLINRRPASASPYQSTLIQLSF 202
           +G++AI+ S      S  E  L G   AL A   Y+   LI +R +   P+   LIQ++ 
Sbjct: 133 LGMLAIV-SAHGAGQSNGEDYLLGIALALGAAFLYAIAALIIKRLSGTPPHLIALIQVTT 191

Query: 203 GALCLLPFALHQAVMPSLTQWFWLALIGVFPGFLAILFAVKALRVLPAATFGTLAYIEPV 262
           G L L P+     +   +     L  +G+    L  +    A++ LP A  G L++I P+
Sbjct: 192 GVLLLAPWVTLGGLPVEVPALASLLTLGMVHTGLMYVLLYSAIQRLPTALTGALSFIYPI 251

Query: 263 TVVILGWSLFAEHLTPMQLMGCGLIICA 290
             +++ W  F   L P+Q +G GLI+ A
Sbjct: 252 AAILVDWVAFGHRLAPLQWLGVGLILLA 279