Pairwise Alignments

Query, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  232 bits (592), Expect = 2e-65
 Identities = 163/514 (31%), Positives = 254/514 (49%), Gaps = 42/514 (8%)

Query: 49  LTYRKLEERSRAFAAYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLY 108
           L +    +R     A L+ +L ++ GDRV +M  N  ++    FG    G V+  VN  +
Sbjct: 27  LDFAGFTDRVARLGAVLR-QLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRW 85

Query: 109 TPRELKHQLNDSGAKAIVVVSNFANTLEQVVE-QTPVKSVILTGLGDLLSAPKRTLVNFV 167
            P+E+ + L+D   + ++V   FA    ++    + +++V+  G G    A    +V + 
Sbjct: 86  NPKEVAYSLDDCDTRILLVDDVFAPMAAELRGLSSSLRTVVYCGDG----AVPEGMVGYE 141

Query: 168 VKYIKKMVPKYHLPHAISMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLT 227
              +    P    PH                       D++A + YTGGTTG  KG MLT
Sbjct: 142 A-LLAATDPAEDAPH---------------------DSDELAAVMYTGGTTGQPKGVMLT 179

Query: 228 HGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRD 287
           HG++  N L   AA      D    V  A P++H+    V     +     +++     D
Sbjct: 180 HGSLCINALGTVAALPRDTQDAAAIV--AAPMFHVAGCGVALQSLMRLVPVHVVPVF--D 235

Query: 288 IPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADK-WQ 346
             A +  L+    T +  V T+   ++    F   D S+L+L   G   +  A+ D+  +
Sbjct: 236 ELAVLRTLQSARITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMR 295

Query: 347 GITKTRLLEGYGLTEASPLLTCCPYNL-------EGYNGSIGFPVANTDMQVRDEEGNVL 399
               T   + YG+TE SP++T  P +        E    S G P+   ++++ D + N +
Sbjct: 296 AFPGTAFAQVYGMTELSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEV 355

Query: 400 PQGETGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMI 459
           P G+ GE+ A+GP VMKGYW +P+ET   + + G++ TGD GYMDE+GF F+VDR KDMI
Sbjct: 356 PFGQVGEIVARGPMVMKGYWNKPKETEAAL-RGGWMHTGDGGYMDEEGFVFVVDRMKDMI 414

Query: 460 LVSGFNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVKVFVVPKD-KSLTEEQVIKHC 518
           +  G NV+  EVE  +A  P+VL  A +GVP +  GE V   +V ++  +L  E VI HC
Sbjct: 415 VSGGENVYSAEVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHC 474

Query: 519 RHHLTGYKIPKLVEFRDELPKSNVGKILRRELRD 552
           R  + GYK P+ VEFRD LP S  GK+ + +LR+
Sbjct: 475 REQIAGYKCPRSVEFRDALPLSAAGKLQKFQLRE 508