Pairwise Alignments

Query, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  592 bits (1527), Expect = e-173
 Identities = 293/557 (52%), Positives = 396/557 (71%), Gaps = 7/557 (1%)

Query: 5   WTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRAFAAY 64
           W    P  VP+ ID   Y+S++++FE S  ++AD+PAF N+G TL+Y +LE  S AFAA+
Sbjct: 6   WNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAW 65

Query: 65  LQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKA 124
           LQ    L+ G+R+A+ MPN+LQYPIA+FG +RAG++VVN NPLYT RE++HQ  DSGA+A
Sbjct: 66  LQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARA 125

Query: 125 IVVVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLPHAI 184
           +V ++ F   +++V+  T ++ +I   +GDLL A K  LVN VV  +KKMVP Y LP A+
Sbjct: 126 LVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAV 185

Query: 185 SMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSP 244
             +Q L +GR L     ++  DDIA LQYTGGTTG++KGAMLTHGN+V+N+LQ  A +S 
Sbjct: 186 PFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQ 245

Query: 245 -------LLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKK 297
                  LL DG+E ++  LPLYHI+A T NC+  +  G +N+LITNPRDIP F+ EL K
Sbjct: 246 HGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGK 305

Query: 298 HPFTALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGY 357
             F+AL G+NTLF AL+    F+ LDFS LK++  GG A+ +A A++W+ +T  R++EGY
Sbjct: 306 WRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGY 365

Query: 358 GLTEASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKG 417
           GLTE SP+ +  PY      G++G PVA T  +V D++GN LP GE GEL  KGPQVMKG
Sbjct: 366 GLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKG 425

Query: 418 YWQRPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVAL 477
           YWQ+PE TA+ +D +G+  TGDI  +D  GF  IVDRKKDMI+VSGFNV+PNE+E+VV  
Sbjct: 426 YWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMG 485

Query: 478 HPKVLEVAAVGVPHEVSGELVKVFVVPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDEL 537
           HPKV   AA+GVP E SGE VK+FVVP++  L+ +++  +C+ + TGYK+PK +  R+ L
Sbjct: 486 HPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIVLRESL 545

Query: 538 PKSNVGKILRRELRDEA 554
           P + VGKILRRELRD A
Sbjct: 546 PMTPVGKILRRELRDIA 562