Pairwise Alignments

Query, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 8e-64
 Identities = 160/534 (29%), Positives = 260/534 (48%), Gaps = 19/534 (3%)

Query: 29  FESSVAKYADQPAFVN--MGATLTYRKLEERSRAFAAYLQNELKLQKGDRVAIMMPNLLQ 86
           F+++VA+  D  A V+   G   ++R+L E+   +A  L   L +  GDRV I  PN  Q
Sbjct: 24  FDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALI-ALGVNTGDRVGIWSPNCAQ 82

Query: 87  YPIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKAIVVVSNFANTLEQVVEQTPVKS 146
           + I      + G ++VN+NP Y   EL++ L  SG + +V    F  +    + Q  V  
Sbjct: 83  WCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPE 142

Query: 147 VILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLP-HAISMRQSLSKGRRLQYVKPTIKG 205
           +     G+L S     L   +   +    P   LP HA + R   +        + +++ 
Sbjct: 143 LASAAPGELASECLPELRGVIS--LAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQF 200

Query: 206 DDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFAL 265
           D    +QYT GTTG  KGA L+H NI++N      +   L    ++ +V  +PLYH F +
Sbjct: 201 DQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGES---LGLTARDRMVIPVPLYHCFGM 257

Query: 266 TVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDFS 325
            +  L  +  G+  +   +  D    +  + +   T L GV T+F A++       +D S
Sbjct: 258 VMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLS 317

Query: 326 NLKLSIGGG----MAVQRAVADKWQGITKTRLLEGYGLTEASP--LLTCCPYNLEGYNGS 379
            L+  I  G    + V R V D+        +   YG+TE SP  L T    +LE    +
Sbjct: 318 TLRSGIMAGATCPIEVMRRVIDQMH---MAEVQIAYGMTETSPVSLQTGPDDDLELRVTT 374

Query: 380 IGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGD 439
           +G      + ++ D +G ++P+GE GEL  +G  VM GYW  P+ TA  ID  G++ +GD
Sbjct: 375 VGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGD 434

Query: 440 IGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVK 499
           +  MDEQG+  IV R KDMI+  G N++P E+EE    HP V +   +G+P    GE + 
Sbjct: 435 LAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIV 494

Query: 500 VFV-VPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKSNVGKILRRELRD 552
            ++ +    S T E++   C+  +  +K+P+ + F DE P +  GK+ +  +R+
Sbjct: 495 AWIKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMRE 548