Pairwise Alignments

Query, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  242 bits (617), Expect = 3e-68
 Identities = 165/532 (31%), Positives = 265/532 (49%), Gaps = 11/532 (2%)

Query: 27  DLFESSVAKYADQPAFV--NMGATLTYRKLEERSRAFAAYLQNELKLQKGDRVAIMMPNL 84
           D F+++VA++ D+ A V  +     T+R+L +     A  L   L +Q GDR+ I  PN 
Sbjct: 22  DAFDATVARFPDREALVVHHQALRYTWRQLADAVDQHARALM-ALGVQPGDRLGIWAPNC 80

Query: 85  LQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKAIVVVSNFANTLEQVVEQTPV 144
            ++ I  F   + G ++VN+NP Y   EL + L  SG + ++    F  +    + Q  +
Sbjct: 81  AEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLL 140

Query: 145 KSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLPHAISMRQSLSKGRRLQYVKPTIK 204
             +  +  G L+   +   +  VV       P +   HA+  R  +  G  L   +  ++
Sbjct: 141 PGLASSQPGALI-CERFPELRGVVSLALSPPPGFLAWHALQARAEVVSGEALAARQAQLR 199

Query: 205 GDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFA 264
            DD   +QYT GTTG  KGA L+H NI++N      +      D    +V  +PLYH F 
Sbjct: 200 CDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDR---LVVPVPLYHCFG 256

Query: 265 LTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDF 324
           + +  L  +  G+  +  ++  D  A +  + +   TAL GV T+F A +   +    D 
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDHPQRGEFDL 316

Query: 325 SNLKLSIGGGMAVQRAVADKWQG-ITKTRLLEGYGLTEASP--LLTCCPYNLEGYNGSIG 381
           S+L+  I  G      V  +  G +    +   YG+TE SP  L T    +LE    S+G
Sbjct: 317 SSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSLQTGAADDLERRVTSVG 376

Query: 382 FPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGDIG 441
                 + +V D EGN +P+GE GEL  +G  VM GYW  P+ TA+ ID +G++ TGD+ 
Sbjct: 377 RTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDLA 436

Query: 442 YMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVKVF 501
            MDEQG+  IV R KDMI+  G N++P E+EE    HP V +V  +GVP    GE +  +
Sbjct: 437 VMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAW 496

Query: 502 V-VPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKSNVGKILRRELRD 552
           V +    +++E ++ +  R  +  +K+P+   F DE P +  GK+ +  +R+
Sbjct: 497 VRLHPGHAVSEVELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMRE 548