Pairwise Alignments

Query, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  233 bits (594), Expect = 1e-65
 Identities = 171/533 (32%), Positives = 275/533 (51%), Gaps = 41/533 (7%)

Query: 28  LFESSVAKYADQPAFVNMGATLTYRKLEERSRAFAAYLQNELKLQKGDRVAIMMPNLLQY 87
           L   S   + ++ A ++    LT+ +LE+R+   A+ L  +  +  G+ VAI+ PN  + 
Sbjct: 6   LSSRSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQ-GIATGEHVAILAPNRAEL 64

Query: 88  PIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKAIVVVSNFANTLEQVVEQTPVKSV 147
             A     +AG+V V VN    P E+   LND+ + A++  +  A  L    ++ P   +
Sbjct: 65  VEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPALRL 124

Query: 148 ILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLPHAISMRQSLSKGRRLQYVKPTIKGDD 207
           I+T LG+                         + +A  + Q  S     Q +   +  D 
Sbjct: 125 IVT-LGERGG---------------------DITYAALLAQGSS-----QPISCDLPDDA 157

Query: 208 IAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFALTV 267
           +A L YT G++GV K AML+ GN  + + ++ A+ +   A G + +    P+ H   + +
Sbjct: 158 LAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLASPTRRAAPG-DVMAHVGPITHASGMQL 216

Query: 268 NCLLFLHKGANNLLITNPRDIPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDFSNL 327
             LL +  GA NLL+    D    +  +++   T L  V  + N LV+  + +  D S+L
Sbjct: 217 MPLLAV--GACNLLLERYDD-QLLLETIQREGVTRLFLVPAMINRLVNFPDVERYDLSSL 273

Query: 328 KLSIGGGMAVQRAVADKWQGITKTRLLEGYGLTEASPLLTCCP---YNLEGYN----GSI 380
           +L + G   +  A+  +   +    L +GYG  E   L+T      +  EG +     S 
Sbjct: 274 RLVMYGAAPMAPALVKRAIEVFGPILAQGYGAGETCSLVTVLTEQDHLCEGGDYRRLASC 333

Query: 381 GFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGDI 440
           G     TD++V ++    +  GE GE+  KGP +M+GYW+ P  TA+V+ +DGY  TGD+
Sbjct: 334 GRCYFETDLRVVNDHFQDVQPGEVGEIVVKGPDIMQGYWRAPHLTAEVM-RDGYYLTGDL 392

Query: 441 GYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVKV 500
             +DEQG+ FIVDRKK+MI+  GFN++P+EVE+V+   P+V E A VGVP E  GE V+ 
Sbjct: 393 ATVDEQGYVFIVDRKKEMIISGGFNIYPSEVEQVLYSMPQVFEAAVVGVPDEQWGEAVRA 452

Query: 501 FVVPK-DKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKSNVGKILRRELRD 552
            +V K   +L E+ VI+HC   L G+K P+ V+F  ELPK+  GK++RR +RD
Sbjct: 453 VIVLKPGMALQEQDVIEHCAQALAGFKKPRAVDFVSELPKNPNGKVVRRLIRD 505