Pairwise Alignments

Query, 329 a.a., putative transglycosylase (RefSeq) from Shewanella loihica PV-4

Subject, 348 a.a., membrane-bound lytic murein transglycosylase B from Pseudomonas putida KT2440

 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 16/289 (5%)

Query: 44  EQGIAQGTIDAVFDQIKLFKKAMVNEPAANGPQNGPQNLDTYLPERVSEALVEQARGLYR 103
           + G A   +  VF +++  K+++++  A + P    +    Y P  +++A + +    +R
Sbjct: 60  DYGFAPEQLMGVFREVQR-KQSILD--AISRPAERVKPWKDYRPMFITDARIARGVDFWR 116

Query: 104 DNKALFDRLGKEYGVQPRFILAYWGIASAF--DASDYPALTVIASNAYHSDGQDAAFLAA 161
            ++A+  R  +EYGV  ++I+A  G+ + F  +  +Y  +  +++  +    +   F   
Sbjct: 117 QHEAVLARAEQEYGVPAQYIVAIIGVETFFGRNTGNYRVIDALSTLGFDYPPRAEFFRKE 176

Query: 162 LK----LMERDQLSFDSLKSDASGLMGYPHFTPKQLAKYGKDGNGDGKVDIWQNLADAFA 217
           L+    L   +QL   +LK   +G MG P F P     Y  D +GDG ++IW N  DA  
Sbjct: 177 LREFLLLAREEQLDPLTLKGSYAGAMGLPQFMPSSFRNYAVDFDGDGHINIWNNPDDAIG 236

Query: 218 TTANYLKQLGWDYDGTWGRQVKSPSELPKDLVGLEVHKGFDQWQALGVRRFNGSDLPS-- 275
           + A+Y K+ GW      G  V S + +  +     +  G +  + +G  R  G  +    
Sbjct: 237 SVASYFKRHGW----VAGEGVVSRAWVEGERADEGLTTGIEPVKTVGELRTLGWSVHDSL 292

Query: 276 RKDMQVSLIRPDGKGGRSY-LVYDNYRVLRQTQASDHLTLAVTYLSERI 323
           R D+ V+  R +G+ G  Y +   N+  + +   S    +AV  L+E++
Sbjct: 293 RDDLPVTAFRLEGESGPEYWMGLKNFYAITRYNRSVMYAMAVHQLAEQL 341