Pairwise Alignments

Query, 567 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) from Shewanella loihica PV-4

Subject, 550 a.a., Protein UshA from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  551 bits (1421), Expect = e-161
 Identities = 285/560 (50%), Positives = 375/560 (66%), Gaps = 20/560 (3%)

Query: 4   KLLKGLVATAVLAALAGCNSSDDDKAPTTCAEAGTACTKFTVLHTNDNHGRFWENKDGEY 63
           KLL+  VA A+L      +        T  A       K TVLHTND+HG FW N+ GEY
Sbjct: 2   KLLQRGVALALLTTFTLASE-------TALAYEQDKTYKITVLHTNDHHGHFWRNEYGEY 54

Query: 64  GMAARKTLIEKIRAEVAANGGETLLLSGGDINTGVPESDLQDALPDFLGMNDIGYDAMAV 123
           G+AA+KTL++ IR EVAA GG  LLLSGGDINTGVPESDLQDA PDF GMN +GYDAMA+
Sbjct: 55  GLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAI 114

Query: 124 GNHEFDNPLAVLDSQRSIANFPMLAANIY-KEDGTRYFEAYKVFDVNGIKIAVIGLTTED 182
           GNHEFDNPL VL  Q   A FP+L+ANIY K  G R F+ + +F    +KIAVIGLTT+D
Sbjct: 115 GNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDD 174

Query: 183 TAKLGNPEFISGLKFTDPKEEIVKVIKEIKDAKAADLIFATTHMGHYANGEHGSNAPGDV 242
           TAK+GNPE+ + ++F  P +E   VI+E++  +  D+I A THMGHY NGEHGSNAPGDV
Sbjct: 175 TAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDV 234

Query: 243 ALAKALEQGQLQAVIGGHSQNPVCM--EGGEYADFAPGDECTPDQQNGTYIMQAHEWGKY 300
            +A+AL  G L  ++GGHSQ+PVCM  E  +  D+ PG  C PDQQNG +I+QAHEWGKY
Sbjct: 235 EMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKY 294

Query: 301 VGRADFEYFNGELHLANYKLVPVNLVKKVKDEQGNETKVLVGEAIEADAALKEMLSYYQE 360
           VGRADFE+ NGE+ + NY+L+PVNL KKV  E G   +VL    I  +  +  +LS +Q 
Sbjct: 295 VGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQN 354

Query: 361 RGQGQLDEVIASTDGLLDGERANVRYMQTNLGRLIADAQRTKVAADVGVMNSGGVRASIE 420
           +G+ QL+  I  T+G L+G+R  VR++QTN+GRLI  AQ  +  AD  VM+ GG+R SIE
Sbjct: 355 KGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIE 414

Query: 421 AGDISYRDVLTVQPFGNMVTLSTMTGEELSAYLGEVASLQIGAGAYAQITGVKMTVDCAA 480
           AGDISY++VL VQPFGN+V  + MTG+E+  YL  VA ++  +GAY Q   V       A
Sbjct: 415 AGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSF----VA 470

Query: 481 KTVAISE--VNGKEYSATGSYTMTVPSYNAAGGDGYPKLNP----VQTGYVDAEVLYTFF 534
           K   +++  + G+      +Y M   ++NA GGDGYP+L+     V TG++DAEVL  + 
Sbjct: 471 KDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYI 530

Query: 535 KDAGTIVAADYNPVGDIVYE 554
           + +  +  + Y P G++ ++
Sbjct: 531 QKSSPLEVSVYEPKGEVSWQ 550