Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

Subject, 248 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

 Score =  234 bits (597), Expect = 1e-66
 Identities = 129/240 (53%), Positives = 162/240 (67%), Gaps = 17/240 (7%)

Query: 7   AKRQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAI 66
           A R V+LDTETTGM      V  GHRIIEIGCVE++ R+LTGRHFH Y+ P +  DE AI
Sbjct: 2   AIRSVVLDTETTGM-----PVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDRDSDEGAI 56

Query: 67  TVHGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLL--TPRGPKT 124
            VHGIT+EF+  KP FA++A  F EFI+GA+++ HNA FDV F+++EF+L+  T R    
Sbjct: 57  GVHGITDEFLKGKPRFAEVADEFFEFINGAQLIIHNAAFDVGFINNEFALMGQTDRA-DI 115

Query: 125 TDICQVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGG 184
           +  C +LD+L +A+  HPGQ+N+LDALCKRYG+DNS RELHGALLD+EILADVYL MTGG
Sbjct: 116 SQHCSILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGG 175

Query: 185 QTKFEL---------SNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLVEKS 235
           QT   L         S E  G     I RL  +R    +I AS  +L  H  RL+ + KS
Sbjct: 176 QTSLSLAGNASDGSGSAEGSGNRPSEIRRLPADRKPTTIIRASEQDLAEHAARLEAIAKS 235