Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

Subject, 249 a.a., DNA polymerase III subunit epsilon from Paraburkholderia sabiae LMG 24235

 Score =  216 bits (551), Expect = 3e-61
 Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 10/237 (4%)

Query: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68
           RQ+ILDTETTG+N   G      RIIEIGCVE++NR+LTG + H Y+NP +  D  A+ V
Sbjct: 2   RQIILDTETTGLNARTG-----DRIIEIGCVELVNRRLTGNNLHFYVNPERDSDPGALAV 56

Query: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128
           HG+T EF++DKP FA+IA    +F+  AE++ HNA FD+ F+D EF+LL    P +    
Sbjct: 57  HGLTTEFLSDKPKFAEIANELRDFLQDAELIIHNAPFDIGFLDAEFALL-GLPPFSKHCG 115

Query: 129 QVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTK- 187
           +V+D+L  AK + PG++N+LDALC R+GI N+ R LHGALLD+E+LA+VYL MT GQ   
Sbjct: 116 EVIDTLVRAKSMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESL 175

Query: 188 -FELSNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLVEKS--GQCIWR 241
             ++  E  G E+GG  R+  +   L V+ AS DEL+ HE  LD ++K+  G  +WR
Sbjct: 176 VIDMIGEAAGGEAGGTQRVKLDTLELVVLAASDDELSEHEALLDGLDKALKGTSVWR 232