Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

Subject, 245 a.a., DNA polymerase III subunit epsilon from Pectobacterium carotovorum WPP14

 Score =  267 bits (682), Expect = 2e-76
 Identities = 138/238 (57%), Positives = 171/238 (71%), Gaps = 6/238 (2%)

Query: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68
           RQ++LDTETTGMN+  G  Y GH+IIEIG VEVINR+LTGRHFH YI P + +D EA  V
Sbjct: 7   RQIVLDTETTGMNK-LGVHYEGHKIIEIGAVEVINRRLTGRHFHVYIKPDRLVDPEAYNV 65

Query: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128
           HGI++EF+ADKP +A I   FL+FI GAE+V HNA FD+ FMD+EF LL    PKT   C
Sbjct: 66  HGISDEFLADKPTYADIVDDFLDFIRGAELVIHNATFDIGFMDYEFRLLNRDLPKTETFC 125

Query: 129 QVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTKF 188
           ++ DSL +A+ + PG++N+LDALC RY IDNS+R LHGALLDAEILA+VYL MTGGQT  
Sbjct: 126 KITDSLLMARKIFPGKRNSLDALCDRYQIDNSKRTLHGALLDAEILAEVYLAMTGGQTSL 185

Query: 189 ELSNEKPGQESG----GIIRLANNRPSLKVIGASADELNMHEQRLDLV-EKSGQCIWR 241
             S E   Q+       I R+   + +LKV+ A   EL  HEQRLDL+ +K G C+WR
Sbjct: 186 TFSMEGETQQKSENTETIQRIVRPQSALKVLYADEAELLAHEQRLDLIAKKGGSCLWR 243