Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

Subject, 246 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  266 bits (681), Expect = 2e-76
 Identities = 136/237 (57%), Positives = 170/237 (71%), Gaps = 5/237 (2%)

Query: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68
           RQ++LDTETTGMNQ  GA Y GH+IIEIG VEVINR+LTG +FH Y+ P + +D EA  V
Sbjct: 10  RQIVLDTETTGMNQ-IGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGV 68

Query: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128
           HGI +EF+ DKPVFA +   FL++I GAE+V HNA+FD+ FMD+EF LL    PKT   C
Sbjct: 69  HGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFC 128

Query: 129 QVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTKF 188
           +V DSL +A+ + PG++N+LDALC RY IDNS+R LHGALLDA+ILA+VYL MTGGQT  
Sbjct: 129 KVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSM 188

Query: 189 ELSNEKPGQESGG---IIRLANNRPSLKVIGASADELNMHEQRLDLVE-KSGQCIWR 241
             + E   Q   G   I R+      L+V+ AS +EL  HE RLDLV+ K G C+WR
Sbjct: 189 TFAMEGETQRQQGEATIQRIVRQASRLRVVFASEEELAAHESRLDLVQKKGGSCLWR 245